Telopea speciosissima (New South Wales waratah): 122641994
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Entry
122641994 CDS
T07910
Name
(RefSeq) rRNA biogenesis protein RRP5
KO
K14792
rRNA biogenesis protein RRP5
Organism
tss
Telopea speciosissima (New South Wales waratah)
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tss03009
]
122641994
Ribosome biogenesis [BR:
tss03009
]
Eukaryotic type
90S particles
Other 90S particles
122641994
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP5
OB_RRP5_4th
OB_RRP5
Spt6_S1
HAT_Syf1_CNRKL1_N
Suf
HAT_PRP39_C
HAT_PRP39_N
HAT_Syf1_CNRKL1_C
NRDE-2
KdpD
Motif
Other DBs
NCBI-GeneID:
122641994
NCBI-ProteinID:
XP_043691300
LinkDB
All DBs
Position
10:1856769..1950383
Genome browser
AA seq
1933 aa
AA seq
DB search
MAARPNKSPKKNSRDGPKHQSFKKTSKIKHESKEANGRKVLPVVMEDDAPDFPRGGKSAL
SRQEEDEVRAEVDAEFEAEERELKKMRKMKQKKSYAMEEDLGSLFGGGGITGKLPRFVNK
ITLKNVSPGMKLWGVICEVNQKDLVVTLPGGLRGLVRANEASDIFSENEVKDADGNYLSS
IFCIGQLVSCIVLQVNDDKMEDKGKKKIWLSLRLSLLHKGLTFDAVQEGMILSAYVKSIE
DHGCILHFGFASFSGFLPIKTQTDSSEAKMITGQLLQGVVRSIDKARRVVYLSSDPDIVS
KSVTKDLKGISIDLLVPGMMVNARVESTLENGIMLSFLTYFTGTVDIFHIQTSFPATNWR
ENYSRNKKVNARILFIDPSTRAVGLTMNPHLVYNKAPPFHVKIGDIYDGSRVVRVDKGLG
LLLEVPSTPVPTPAYVSIFDVADEEVQKLEKKFKEGNHVRVRILGLRHLEGIAVGVLKAS
AFEGSVFTHSDVKPGMVVKAKVIAVESFGAIVLLSSGVKALCPLPHMSEFDIAKPRKKFK
IGAELVFRVLGCKSKRITVTHKKTLVKSKLGILSSYADATNGLVTHGWITKIEKHGCFVR
FYNGVQGFASRNELGLEPGCDASSMYHVGQVVKCRVVSAIPASRRINLSFILSPMRAAVD
DIAKVGNLVSCIVERLTPQAVIVYVKAKVYLKGSISMEHLADHQGHAALMKSNLKRGYEF
DQLLVLDVDGNSLILSAKYSLINSAKQIPLDLAEIHPNSVVHGYVCNLIETGCFVRFLGR
LTGFSPKNKATDSERVNLSEAFYIGQSVRSKIVNVNNEMGRITLSLKQSSCYSTDASLIQ
GYFLLEEKIARLQMSESVVTDTNWVESFKTGSIVEGEIHQSNDFGVVLSFKEHNDVFGFI
SHYHLGGTTAGIGSVVRAVVLDISVAERLVDFSLKPELVHSIKEDISNCRTPKKKRKRES
SMDLEVHQTVKATVEIVKENYLVLSLPEHNNTIGYASITDYNTQKLPQKHFVNGQSVLAT
IEALPSPLTTGRLLLLLNSHSEVAGVSSSKRAKKRSSYNVGSLVEAEITDIKPLELSLKF
GIGFRGRVHITEVNDDKIVEDPFSKFKIGQLLTARIVGMANKSEKTKKTNWWELSVRPTM
LSGAGDVEGGIAKDSFDFSTGQCVTGYVVKVDREWVWLAVSRHVKARLFLLDSSSEPNEL
QEFQNRFHVGKAFTGYIFSINKEKKLLRLVSRPLCVVSNGELGNETVNMDDPGSTNSNQG
ITTHLHKGDILGGRIIKIFPGVGGLLVQIGPHLYGKVHFTELADKWVPNPLLGYHEGKFV
KCVVLEVGNAVNGPVHVDLSLRTCLEGIHSQKSVGQVDDVDLPNKRVENIEDLHPNMIVK
GYVKNVSKGCFIMLSRKIDAKILLSNLSDGFIENPEKEFPIGKLVNGKVLSVEPLSKRVE
VTLKSATSRGESKSGLVDLSSLHVGDVISGKIKRVETYGLFIIIDHTNMVGLCHLSELSD
DHIDNIESKYRAGDRVVAKVLKVDEERHRISLGMKSLYISDDTSSHVLSDQNNFEVVDGN
GTSDDSQISMPEENSLHGIQDAVFETEECPILAQAESRASIMPLEVALDDMENSDSENII
SRTQEHVNKADTPAEKNERRAKRKAKEEREKEIMAAEARLLAKDKPSTADEFEKLVRSSP
NSSFVWIKYMDFALSLSDVEKARSIAERALRTINIREEAEKLNIWVAYFNIENEYGNPRQ
EAVMKVFQRALQYSDPKKVHLALLGLYERTEQHNLADELLEKMVRKYKHACKVWLRQVQS
LLKQGKDVQTTVNRALLSLPRNKHIKFISQTGILEFKSGVPDRGRSMFEGMLREYPKRTD
LWSIYLDQEIRLGDVEFIRALFERATSLSLPPKKMKFLFKKYLEFEKSHGDEERVEYVKR
KAMEYVESSLTGS
NT seq
5802 nt
NT seq
+upstream
nt +downstream
nt
atggcggcacgacccaataaatccccgaagaagaactctagagacggaccaaagcatcag
agcttcaagaaaacctcaaagatcaagcacgagtctaaagaggctaatgggcggaaggtc
ttaccagtggtaatggaagacgatgctccggactttcctcgaggcggaaaaagtgctctg
agtagacaggaagaggatgaagttcgtgccgaagttgatgctgaattcgaagcagaggag
agggagttgaagaaaatgaggaagatgaaacagaaaaagagttatgctatggaggaagat
ttgggatcacttttcggtggcggtggtattacagggaagctacctagatttgtgaataag
atcactttgaagaatgtttctcctggaatgaagctgtggggagtcatatgtgaagtcaac
cagaaagatcttgtagtcactcttccaggggggctacgaggattagttcgtgcaaatgaa
gcttctgatattttttcagagaatgaagttaaggatgctgatggtaattacctttccagc
atattttgcattgggcagcttgtttcctgcatagttttgcaagtcaatgatgacaaaatg
gaggataaggggaagaaaaagatctggctttctctgcgtctttctttgttgcataagggc
ctcacgtttgatgctgttcaggaagggatgatcttgtcagcatatgtgaaaagcattgaa
gaccatggttgcattcttcattttggatttgcttcttttagtgggtttttgccaataaaa
acccaaactgacagtagtgaggccaagatgatcactgggcagcttctacaaggggttgta
agaagtattgataaagcccgtagagttgtttatctgagttctgatcctgatatagtgtct
aaatctgtgaccaaggatcttaagggcatctcgattgatctgttagttccaggcatgatg
gttaatgcccgtgtagaatcaactcttgaaaatgggattatgctatcatttcttacttat
tttacaggaactgttgatatttttcatatacaaacttcttttccagccacaaattggaga
gagaattatagtcgaaataagaaggtgaatgctcggatattatttattgatccctcaacc
agagctgttggtctgacaatgaaccctcaccttgtttataacaaagctcctccttttcat
gttaagattggcgatatttatgatggttctagagtagttagagttgataaaggactaggc
cttctgcttgaagttccatctactccagtgccaactcctgcttatgtcagtatatttgat
gtggctgatgaagaagttcagaaactggagaaaaaatttaaggaagggaatcatgttcgt
gttcgaattcttggattgagacatttagaagggattgctgtgggagttttaaaggccagt
gcttttgagggatcagtttttacccattcagatgtcaagcctggtatggtggtcaaggcg
aaggtcattgctgttgagagctttggtgctattgtgctgctatctagtggtgttaaggcg
ctttgtcctcttccgcacatgtctgaatttgacattgcaaagcctaggaaaaaattcaag
attggagctgaactggtattccgtgtgcttggttgcaagtcaaagagaattactgtcaca
cacaagaaaacacttgtgaagtcaaagcttggaattcttagttcgtatgctgatgcgacc
aatggactagtgactcatggatggatcacaaaaattgaaaaacatggatgctttgtgaga
ttttacaatggggtgcaaggatttgcatctagaaatgagcttggactagaacctggatgt
gatgcaagttcaatgtatcatgttggtcaagttgtcaaatgtagggtcgtaagtgccatt
cctgcttcacggaggatcaacctaagtttcatattatctcctatgagggctgctgtagat
gatattgccaaagttggtaacttagtttcttgcattgttgagcgtttgactccacaagct
gttattgtatatgtgaaggcaaaagtttacttgaaggggagtatatctatggagcattta
gcagatcatcaagggcatgctgctttaatgaagtcaaatttgaagcgtggatatgaattc
gatcaacttctggtgttagatgttgatggcaacagcttgatactctctgcaaaatattct
cttattaactctgccaaacagattcctcttgatcttgctgagattcatcctaattcagtg
gttcatggttatgtctgcaatttaattgaaactggatgctttgtccgctttcttggacgc
ttgactggtttctcacccaaaaataaagccaccgattctgaaagggtcaatctctcggaa
gcattttacatcgggcaatctgttcgcagtaaaatagtcaatgttaataatgaaatgggt
agaataacactttctttgaagcagtcatcttgctattcaacagatgcatctttaattcaa
ggatattttctattggaagagaagattgctagactgcaaatgtcagaatctgtggtcact
gatacaaattgggtggaaagttttaaaactgggagtattgttgagggagagattcatcag
tcaaatgattttggagttgttcttagctttaaggagcataatgatgtttttggatttatt
tcacattatcatttaggtggaacaactgcaggaataggttctgttgttcgagctgttgtt
ctcgacatttctgtggcagaacggcttgtggatttctctcttaagccagagcttgttcat
tcgatcaaggaagacatttccaactgccggactcccaagaagaaacgcaaaagagagtca
tctatggacttggaggtacatcagactgtgaaggccactgtagagattgtgaaagagaat
tacttggttctctcactacctgagcataataatactataggttatgcgtccataactgac
tataacacacaaaagcttcctcagaaacattttgtgaatgggcaaagtgttcttgccacc
attgaagctcttccaagcccgttaacaactggaagattgcttctgcttcttaactctcat
agtgaagttgctggggtctctagttctaaaagggccaagaaaaggtctagctacaatgtg
gggtcacttgtggaggcagagattactgacataaagcctttggaactgtcgttgaagttc
ggcattggttttcgtgggagggtacatataactgaggtaaacgatgacaaaatagttgag
gacccctttagtaagtttaaaattgggcaactgcttactgcaagaattgttggcatggct
aacaagtcagaaaagactaaaaaaactaattggtgggaactctccgtcagacccacaatg
ctttcaggagcaggggatgtggagggcggcattgcgaaagacagttttgatttttcaact
gggcaatgtgtcactgggtatgtggttaaagtggacagggaatgggtatggttagcagta
tctcgacatgtgaaagctcgtctgtttcttcttgatagttcatctgaaccgaatgaactt
caagaattccaaaacagatttcatgtggggaaagctttcacaggttatattttcagtatt
aataaagagaaaaagctgttgcgcttggtatcacgcccattatgtgttgtctctaacgga
gaacttggtaatgaaactgttaacatggatgatcctggaagcacaaactctaatcaagga
attactacacatttacacaaaggtgatatcctcggtggaagaattatcaaaatctttcca
ggtgttggtgggctgcttgtgcaaattggacctcatctgtatgggaaggttcattttact
gaacttgctgataagtgggttcctaatcctctgcttggatatcatgaagggaagtttgtc
aaatgtgtggtactagaagttggcaatgcagtcaatggtccagtgcatgtggacttgtca
ctacgtacgtgtttagaaggcattcactctcagaaatctgtgggacaagttgacgatgtg
gatctccccaacaagcgggtggaaaatattgaggatcttcatcctaatatgattgtaaag
ggctatgttaagaatgtgtcaaagggttgtttcattatgctttcccgcaagatagatgca
aaaattctcctgtcaaacttgtctgatggatttattgagaaccctgaaaaagaatttccc
attggaaaacttgtaaatggaaaggttctgtcagtggagcctttgtctaagcgagttgaa
gtaactctaaaatcagcgacttcaaggggtgaatcaaaatctggtcttgttgatttaagt
agtctacatgttggagatgttatttctggcaagattaagagggttgagacatatggtctg
tttataattatagatcacacaaacatggttggattatgccatctttcagagctttctgat
gatcatattgacaatattgaaagtaaatacagagcaggagatagagttgtggcaaaggtc
ctgaaggtggatgaagaaagacaccgaatatctcttggaatgaagagtttgtatatcagt
gatgataccagctcccatgtactctcagatcaaaataactttgaggttgttgatggaaat
ggtactagtgatgattctcagattagtatgccagaggagaacagcttacatggcatccaa
gatgctgtatttgaaactgaagaatgcccgatacttgcacaagcagaatcaagggcttcc
attatgcctcttgaggttgctcttgatgatatggaaaactctgattcagaaaacataatt
agtaggactcaggaacatgtcaacaaggcagacactcctgctgaaaagaatgaaaggaga
gcaaagagaaaagcaaaagaagagagggaaaaagaaattatggctgctgaggcgagactt
cttgcgaaagacaagccaagtactgctgatgaatttgaaaaattggttaggagctcccct
aatagtagttttgtctggataaagtacatggattttgctctctctttgtcagatgttgag
aaggctcgatcgattgctgaaagggctttgagaacaataaacattcgagaagaggccgaa
aagttgaatatttgggtggcttattttaatatagaaaatgaatatggaaatcctcgacag
gaggccgtcatgaaagtatttcagagggcactgcagtattctgatcccaaaaaggtgcat
ctcgcattgttagggttgtatgagaggacagagcaacataatctagcggatgagcttctt
gagaaaatggttaggaagtacaagcacgcatgcaaggtttggttaaggcaggtccagagc
ctcttgaaacaaggcaaagacgttcaaactactgttaaccgtgctcttttaagccttcct
cgcaacaaacatatcaaatttatctctcaaactggtatacttgagttcaagagtggtgtg
cctgatagagggcggtcaatgtttgaaggaatgctgagagagtacccaaagagaacagat
ttatggagcatctatcttgatcaagaaattcgacttggagatgtggaatttatacgtgca
ttatttgagagggcaacaagcctaagccttccgccaaagaaaatgaagtttttgttcaag
aagtatcttgagtttgagaaatctcatggggatgaagaacgagtggaatatgtcaagagg
aaagcgatggagtacgtggagagctcactcactggatcttga
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integrated database retrieval system
