Telopea speciosissima (New South Wales waratah): 122642123
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Entry
122642123 CDS
T07910
Name
(RefSeq) E3 ubiquitin-protein ligase SIRP1-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
tss
Telopea speciosissima (New South Wales waratah)
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tss04131
]
122642123
04121 Ubiquitin system [BR:
tss04121
]
122642123
Enzymes [BR:
tss01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122642123
Membrane trafficking [BR:
tss04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
122642123
Ubiquitin system [BR:
tss04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122642123
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-ANAPC11
zf-C3HC4_3
TAPR1-like
zf-RING_10
zf-HC5HC2H
zf-RING_5
zf-C2HC5
Motif
Other DBs
NCBI-GeneID:
122642123
NCBI-ProteinID:
XP_043691477
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All DBs
Position
10:634407..652240
Genome browser
AA seq
357 aa
AA seq
DB search
MGEALDTRYWCYMCSQIVNPVMEVEIKCPFCESGFVEEMDNSNEHESDADPGSDRALSLW
APILLGMMGGGSRRRRFRREEDYSSQQGESEQDRDLESIIRRRRRSSAAILQLLQSLHDG
ITSESDSSESNRERERDHERVILINPFNQAVILQGSFDLNQSDSQSQSTPGSLGDYFIGP
GLDLLLQHLAENDPNRYGTPPAKKEAVEAMPTVKIKDNIQCSVCLEDFEIAAEAKEMPCK
HRFHSGCILPWLELHSSCPVCRFQIPADESKLDSNSSGNNRDNEVQNGGGSSGHGSDRSG
GEESEGGNGNGRRFWVPIPWPFNGLFSFSGSQSGVNASSFIFIFIFHWGFAKCFSNR
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgggtgaagctctggatacaaggtattggtgttacatgtgctctcaaattgtgaaccct
gtaatggaagttgagatcaaatgcccattctgcgaaagcggttttgtggaagaaatggat
aacagtaacgaacacgagagcgatgccgatccgggttctgaccgagcactctctctttgg
gctccgatcttgctcggaatgatgggtggtggttctcggcgtcgaagattcagaagagaa
gaagactacagtagtcaacagggagagtcggaacaagacagggacttggaatccatcatc
aggaggaggaggagaagctcggctgccatcctccaattgcttcagagccttcatgatggg
atcacatccgaatcggatagttcagaaagtaatagggaaagagagagagatcatgagcgt
gttatcctaataaatcctttcaaccaggcagtaattctgcagggctccttcgacctgaac
caatctgatagccaaagtcagagcactcctggttctttgggtgactacttcattggacct
ggtttggatctattgctacagcatttggcagagaatgatcccaacagatatggaacccca
cctgcaaagaaagaggcagttgaagcaatgcctactgtgaaaattaaggacaacattcag
tgttcggtatgcttagaggattttgaaatagctgcagaagctaaggagatgccgtgtaag
catagatttcatagtgggtgtattctgccttggctggagcttcatagttcttgcccagtt
tgtaggtttcagatcccggctgacgaatccaagcttgattcaaattcatccgggaataat
agggataacgaggttcaaaacggcggtggcagcagtggccatggcagtgatcgaagtggt
ggagaggaaagtgaagggggaaatgggaatgggagaaggttttgggttcctattccatgg
cctttcaatgggttgttttctttttcaggatctcagagtggtgttaatgcttcctcattc
atcttcatcttcatcttccactgggggttcgcaaagtgcttctcgaacagatga
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integrated database retrieval system
