Telopea speciosissima (New South Wales waratah): 122642176
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Entry
122642176 CDS
T07910
Name
(RefSeq) E3 ubiquitin-protein ligase RGLG2-like
KO
K16280
E3 ubiquitin-protein ligase RGLG [EC:
2.3.2.27
]
Organism
tss
Telopea speciosissima (New South Wales waratah)
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tss04121
]
122642176
Enzymes [BR:
tss01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122642176
Ubiquitin system [BR:
tss04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122642176
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Copine
zf-C3HC4_3
vWA-TerF-like
zf-C3HC4_2
zf-C3HC4
LdpA_Fe-S-bd
Sina_RING
WD40_RLD
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
122642176
NCBI-ProteinID:
XP_043691540
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Position
10:complement(49745352..49750822)
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AA seq
410 aa
AA seq
DB search
MGGRQSTAHWKPDASFNYEPPSIQTSSSYPSYASHMEPDIRSRHQSRYTKIADNYNSLEQ
VTEALAQAGLESSNLIVGIDFTKSNEWTGARAFNRRSLHHLGESPNPYEQAINIIGRTLS
AFDEDNLIPCFGFGDASTHDQEVFSFYPDERPCNGFEEALLRYRELVPHLRLAGPTSFAP
IIETAVGIVENSGGQYHVLMIIADGQVTRSADTENGQLSRQEQDTINAIVNASKYPLSIV
LVGVGDGPWDLMRQFDDNIPSRAFDNFQFVNFTELMSKNIPNFKKEAEFALAALMEIPSQ
YKATLELHLLGCRKGTQGRIPLPPPNYGSVNSSSKYSRSNSFEQGAGYHHGTSASPPEYP
PRNNQTCPVCFWAAKDLAFGCGHQTCYECGKEMPFCPICSIHITTRIRLY
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgggagggagacagtcaacagcacattggaaacctgatgcttcatttaattatgaacca
ccatcaattcagacttcttcatcctacccctcctatgcatcccacatggaaccagatata
agaagtagacatcagagtaggtacacgaagattgctgacaactacaactcccttgagcag
gtgacagaggctcttgctcaagctggtctggaatcttccaatctcattgttggcattgac
ttcacaaagagcaacgaatggacaggtgcgagagctttcaaccgtagaagcctacatcat
ctgggagagtctccaaacccctatgaacaggcaataaacatcataggaaggacactttca
gcttttgatgaggataacctcataccctgttttggatttggagatgcatcaacgcatgat
caggaggtgtttagcttttatccagatgagaggccatgtaatggctttgaggaagccctt
ctacgatatagggaattagttccacatcttcgactagctggaccaacttcctttgctcca
ataatagaaactgctgttggaatcgtggagaatagtggcggtcaatatcatgttcttatg
ataattgctgatgggcaggtaacacgaagtgctgacacagaaaatggccagttaagtcga
caagagcaggatacaattaatgcaatagtgaacgcaagtaaatacccattgtcaattgtc
ttggttggtgtcggtgacggcccttgggacctgatgcggcagtttgatgacaatattccc
tctcgggcatttgataattttcagtttgtaaattttacagaactcatgtcaaaaaacatt
cccaactttaagaaggaggctgaatttgctctggcagctctgatggaaataccgtcacag
tacaaagcaacattggagctccatctcctgggctgtcggaagggaacccaagggaggatt
cctctccctccccctaattatggttcagtaaattccagttcgaagtattcaagatcaaac
agctttgagcagggtgctggatatcaccacgggacctctgcttctccacctgaatatcct
ccacgcaacaaccagacttgtcctgtgtgtttctgggctgccaaagatcttgcatttgga
tgtggccatcagacatgctatgaatgtggcaaagaaatgcctttctgccccatttgcagc
atccatataaccacaaggataaggctatactaa
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