Telopea speciosissima (New South Wales waratah): 122642393
Help
Entry
122642393 CDS
T07910
Name
(RefSeq) pleiotropic drug resistance protein 2-like
KO
K08711
ATP-binding cassette, subfamily G (WHITE), member 2, PDR
Organism
tss
Telopea speciosissima (New South Wales waratah)
Pathway
tss02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
122642393
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tss02000
]
122642393
Transporters [BR:
tss02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG2, 3 subgroups
122642393
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
PDR_assoc
ABC2_membrane_7
AAA_21
ABC_trans_N
AAA_16
AAA_29
AAA_22
AAA
AAA_23
AAA_30
SMC_N
AAA_33
AAA_18
NACHT
RsgA_GTPase
Rad17
AAA_25
AAA_28
TsaE
nSTAND3
AAA_5
RuvB_N
NTPase_1
PduV-EutP
cobW
RNA_helicase
T2SSE
AAA_7
AAA_17
Zeta_toxin
Ploopntkinase3
ABC_ATPase
NPHP3_N
AAA_19
AAA_11
DO-GTPase1
EBV-NA3
ORC-CDC6-like
IstB_IS21
Motif
Other DBs
NCBI-GeneID:
122642393
NCBI-ProteinID:
XP_043691781
LinkDB
All DBs
Position
1:complement(23205556..23242639)
Genome browser
AA seq
1463 aa
AA seq
DB search
MASVLTGDDLGSSRRSWTSTSFREVWTAPPDVFTRSRRDGENEEEELKWAAIERLPTFDR
LRRGMLKQVLDNGKVVHDEVDLTNLRIQDKKLLLESILKFVEEDNEKFLRRLRDRTERVG
IEVPKIEVRFEHLSVEGDAYVGSRALPTLPNATLNTIEGVLGMVRLSPSKKRIIKMLHDV
SGIVRPSRMTLLLGPPGSGKTTLLQALAGKLDKDIRVTGKITYCGHELSEFVPQRTSAYI
SQHDLHYGEMTVRETLDFSGRCLGVGTRYEMLAELSRREKAAGIKPDPEIDAFMKATAMA
GQETSLVTDYVLKILGLDICADILVGDEMRRGISGGQKKRVTTGEMLVGPAKALFMDEIS
TGLDSSTTFQIVKFMRQMVHIMDVTMIISLLQPAPETYELFDDVILLSDGQIVYQGPREN
ILEFFEFMGFRCPERKGIADFLQEVTSKKDQEQYWLKKDQPYEYISVAEFAESFNSFQIG
QQLCHDLSIPYDRSKAHPAALVKEKYGIPNWELFKACFSSEWLLMKRNSFVYIFKTTQIT
IMSIIAMTVFFRTEMKHGQIEDGTKYYGALFFSLINVMFNGMAELAMTVFRLPVFFKQRD
HLFYPAWAFGLPIWVLRIPLSLMESGIWIILTYYTIGFAPAASRFFRQFLAFFCVHQMAL
SLFRFIAAVGRTQVVANTLGNLTLLLAFVLGGFVVAKDDIVPWMIWGYWSSPMMYGQSAL
VMNEFLDERWSTPNLDSRIPEPTVGKALLESRGFFVQDYWFWICIGALVGYSLIFNVLFI
GALTYLNPFSDTKTVILDDDPEMKCEKSSSDEEHASRSTMASSSYNANTFEGIDMAVRNT
SGSVEDHAPKRGMVLPFQPLSLAFNHLNYYIDMPAEMKKQGIEESRLQLLRDVSGSFRPG
ILTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGFPKNQATFARVSGYCEQSDIHSP
RVTVYESLLFSAWLRLAPEVKKETRKMFVDEVMELVELNPLRNALVGLPGVDGLSTEQRK
RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEA
FDDLLLMKKGGQVIYAGPLGHRSHKLIAYFGSIPGVPKIKDGYNPATWMLEVTTASVETQ
LGLDFAEFYANSTLYKRNQELIKEQTTPAPSAQDLYFPTKYSQTFTTQCKACFWKQYWSY
WRNPPYNAVRFFMTAAIGIVFGVIFWDKGEKMRKQQDLLNLLGAMYAAVFFLGATNATAV
QSVVAIERTVFYRERAAGMYSELPYAFSQVAIEAVYISIQTLLYALLLYSMIGFQWQATK
FLYFYYFIFMSFIYFTMYGMMVVALTPGHQVAAIVMSFFISLWNLFSGFLIPRPQIPIWW
RWYYWASPVAWTLYGIVASQVGDRDSLVTIPGAGEQTIRMFLKDYLGFEHNFIGYVALAH
VGFVLLFFFVFAYGIKFLNFQRR
NT seq
4392 nt
NT seq
+upstream
nt +downstream
nt
atggcatcggtgttgaccggggacgatctagggagtagtcgcagaagttggacttctacg
agctttcgggaggtgtggacggctccacctgatgtcttcacacggagcaggagggatggc
gagaatgaagaggaggaactgaaatgggctgccattgagaggcttccgacgttcgatcgg
ttgaggcgagggatgcttaagcaagttcttgacaatggcaaggttgttcatgatgaggtt
gatcttaccaatcttcggattcaggataagaagctgctcctggagagcattctcaagttc
gtcgaagaagacaacgagaaattccttcgcaggctcagggaccgaactgagcgggttgga
attgaggttcctaagattgaagttcgtttcgagcacttgtcagtagagggagatgcgtat
gttggaagcagggctcttcccactctacccaatgctaccttgaacacaatcgagggagtt
cttggaatggtccggctttcaccatccaagaagaggattatcaagatgcttcatgatgtc
agtggaatagtgagaccatcaaggatgacactgcttctgggacctccaggctcagggaaa
acaacattgttgcaagcccttgcaggaaagcttgacaaggatataagggtaactgggaaa
atcacgtactgtggtcatgagttgtctgaatttgtacctcaaagaacctctgcttatatt
agccagcatgatcttcactatggtgagatgacagtgagagagactttggatttctcagga
cgttgcttgggggttgggaccagatatgaaatgttggcagagttgtccagacgagagaaa
gcagcaggtattaaaccagatcctgagattgatgcattcatgaaggctacagcaatggca
ggccaggaaactagtctggttacagattatgtcctcaagattcttggattggatatctgt
gccgatattctcgtgggtgatgagatgagaaggggaatttctggtggacaaaagaagcgc
gtgactactggagagatgttggttggaccagcaaaagctctcttcatggatgaaatatct
actgggcttgatagttctacaacttttcagattgtcaagttcatgcgacagatggttcac
attatggatgtaaccatgatcatctctcttttacagccagctcctgaaacctatgagctt
tttgatgatgttatactactttcggatggtcagattgtctaccaaggaccacgggaaaat
attcttgagttcttcgaattcatgggtttcagatgcccagaaaggaaaggaattgcagat
tttctccaagaggttacttccaagaaagaccaagaacagtactggctcaagaaggaccaa
ccatacgaatatatttcagttgcagagtttgcagaatcctttaactccttccaaattggt
caacagctttgtcatgatctaagcattccttatgatagaagtaaagcccatcctgctgca
ttggtgaaagaaaagtatggcatccctaactgggagcttttcaaggcatgcttctcaagt
gagtggctgcttatgaagcggaactctttcgtctacattttcaaaaccacccagatcaca
atcatgtcaatcattgctatgactgtgttctttagaacagaaatgaagcatggtcaaata
gaagatggaacaaaatattatggagcattgttcttcagtctgattaatgtaatgttcaat
ggaatggcagagcttgcaatgactgttttcaggcttccagttttcttcaaacagagagat
cacctattttaccctgcatgggcttttggtttaccaatttgggtccttaggatccccctc
tcactaatggaatcagggatatggatcattcttacgtattacactattgggtttgctcct
gcagctagcaggtttttcagacagttcttggcatttttctgtgtacatcagatggctcta
tctctcttccggttcattgcagcagtgggaagaacacaggttgttgccaacacacttggt
aacttaaccttgctattggcttttgtgcttggaggatttgttgttgccaaagatgacatt
gtaccatggatgatatggggctactggtcttcgccaatgatgtatggacagagtgctctt
gtcatgaatgaatttcttgatgaaagatggagcactcccaatctcgattccagaattcct
gaacctacagttggaaaggcccttcttgaatccagaggattttttgtacaagactattgg
ttttggatctgtattggagcacttgtcggttattctcttatcttcaatgttttatttatt
ggggcgctgacatatttaaatcctttcagtgatactaaaactgtaatcctggatgatgat
cctgagatgaagtgtgagaagtcatcttcagatgaggaacatgcatcaagatccacaatg
gctagctcatcatataatgctaacacatttgaaggtattgatatggcagtgaggaacaca
tcagggagtgttgaagaccatgctccgaaaagaggaatggtgttgcctttccagcccctt
tcacttgcattcaatcacttgaattattacatagacatgcctgctgaaatgaaaaagcaa
ggaattgaagaaagccgtctccaattgttgagagatgttagtggttctttcagaccaggt
attctgacggcgttagttggtgtcagtggtgctggaaagaccaccttgatggatgtgcta
gcaggaagaaagaccggtggatacattgaaggaagtatcagcatttcaggtttcccaaag
aaccaagcaacatttgctcgagttagtggttactgtgaacagagtgatatccattcacct
cgtgttactgtttatgagtctctcctgttctcagcctggctgcgtcttgctccagaagta
aagaaggagacacggaagatgtttgttgatgaagttatggagttagttgagcttaatcca
ctgaggaatgccttagttggccttccaggagtggatggtctttcaacagaacagagaaag
aggctcaccatagctgtagagttggttgctaacccatccatcatcttcatggatgagcca
acatcaggtcttgatgctagggctgctgcaatagttatgcgtacagtgagaaatacggtg
gatacaggacgaactgttgtctgcacaattcaccaaccaagcatagacatttttgaagct
tttgatgatttactgttgatgaagaaaggaggacaagtcatttatgctggacctcttggt
caccgttctcacaagcttatagcatactttggttctatccctggcgttcctaaaataaaa
gatggttataaccctgctacatggatgctcgaggtcactactgcttcagttgagacacaa
cttggtcttgattttgcagaattttatgccaattctaccctttataagaggaatcaggaa
ctaatcaaagaacaaaccactccagcaccaagtgcccaggatctttacttccctaccaaa
tactctcaaaccttcaccactcaatgcaaggcttgtttttggaaacagtattggtcatat
tggagaaatccaccgtataatgctgtccgattcttcatgacagcagcaattggtattgta
tttggtgtcatcttttgggacaaaggagagaaaatgagaaaacaacaagacctactcaat
cttctgggagctatgtatgctgctgtttttttccttggtgccactaatgctactgccgtg
caatctgttgtcgcaattgaaagaacagttttctaccgtgaaagagcagcagggatgtat
tcagaattgccttatgcattttcacaggtggccattgaggcggtttacatttcaattcag
accttgctctatgctcttctcctttattccatgattgggttccaatggcaagctaccaag
ttcttgtacttctactacttcatattcatgagctttatctacttcacaatgtatgggatg
atggtggtagcactgactccaggtcaccaagttgctgcaattgttatgtcatttttcata
agcctctggaatttgttctctggttttctcattcctagaccgcaaattccaatatggtgg
aggtggtattattgggcttccccagtggcttggacactctatggcattgtggcttctcag
gtgggtgacagagattcactagtgaccatacctggtgcaggtgaacagacaataaggatg
ttcctaaaggattacctgggctttgagcataacttcattggatatgttgccctagctcat
gttggcttcgtcctcctattcttctttgtctttgcctatggcatcaagttcttgaacttc
caaagaagataa
DBGET
integrated database retrieval system
