Telopea speciosissima (New South Wales waratah): 122642413
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Entry
122642413 CDS
T07910
Name
(RefSeq) rhomboid-like protein 20
KO
K25216
ubiquitin-associated domain-containing protein 2
Organism
tss
Telopea speciosissima (New South Wales waratah)
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tss04121
]
122642413
Ubiquitin system [BR:
tss04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
LMBR1L-GP78-UBAC2 complex
122642413
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA
UBA_7
Rhomboid
DER1
CUE
UBA_RAD5A
Motif
Other DBs
NCBI-GeneID:
122642413
NCBI-ProteinID:
XP_043691804
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Position
10:complement(14918919..14974234)
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AA seq
293 aa
AA seq
DB search
MNGGPSGFQNSPVTKAFVVACALFTVTFGIQGRSSTLGLSYQDVFRKFHFWRFLASGFAF
SSTPELMFGLYLLYYFRVFERQIGSNKYSVFILFSMIVSLLYEVLLLFLVKDPSKVLASG
PYGLIFSSFVPFFFDIPVSTRFRIFGIHISDKSFIYLAGIQLLLSSWKRSILPGLGGILA
GFLYRINLFGFRRMKFPEFVTSFFSSLPWPSAGGSSPTASSGNIIGNMPSYTGRPVEGNY
HSVPVAFTMEPLEDSIATLVSMGFDRHAARQALVQARNDMNIATNILLEAQGH
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgaacggcggcccatctggttttcaaaattctcctgtcacaaaagcgttcgttgttgcg
tgtgccctcttcacagtcacttttgggattcaaggccgttcgtcgacgcttggattatct
tatcaggatgttttcagaaagtttcacttttggaggttccttgcatcaggttttgccttc
tcatcaacaccagaactgatgtttggattgtacctgctctactacttcagagtatttgag
agacagatagggtcaaataaatactcagtctttatcttgttctccatgatcgtgtcattg
ctttatgaggtcctgttattgtttctcgttaaagatccctctaaagtgctagcatctgga
ccctatggtctcatattttcttcatttgtgccatttttctttgacattcctgtttcaaca
cggtttcgtatttttggcattcacatctctgacaagtcattcatatatttagctggtatt
cagcttcttttatcatcttggaagagatctatcttaccaggcttgggtggcattcttgct
ggcttcctatatcgcattaatctttttggcttccgtaggatgaagttccctgaatttgtc
acttcattcttttcgagccttccatggccctctgctggaggttcatctcctacagcatca
agtggaaatattattggaaacatgccttcttacacaggccgcccagtggagggaaactac
cattctgttcctgttgcattcactatggagccacttgaggactccattgctactctggtc
tcaatgggctttgacagacatgcagccagacaggctctcgtacaggctagaaatgacatg
aacattgcaacaaacatactcctcgaagctcagggccattga
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