Telopea speciosissima (New South Wales waratah): 122642437
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Entry
122642437 CDS
T07910
Name
(RefSeq) serine/threonine protein phosphatase 2A regulatory subunit B''beta-like
KO
K11583
serine/threonine-protein phosphatase 2A regulatory subunit B''
Organism
tss
Telopea speciosissima (New South Wales waratah)
Pathway
tss03015
mRNA surveillance pathway
tss04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
122642437
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
122642437
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tss01009
]
122642437
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tss03019
]
122642437
03036 Chromosome and associated proteins [BR:
tss03036
]
122642437
Protein phosphatases and associated proteins [BR:
tss01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
122642437
Messenger RNA biogenesis [BR:
tss03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
122642437
Chromosome and associated proteins [BR:
tss03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
122642437
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_13
EF-hand_7
EF-hand_6
EF-hand_1
EF-hand_5
EF-hand_8
Phage_Inh_C
DUF4187
Motif
Other DBs
NCBI-GeneID:
122642437
NCBI-ProteinID:
XP_043691845
LinkDB
All DBs
Position
10:complement(51031439..51075340)
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AA seq
540 aa
AA seq
DB search
MDMELVGDVAALDIELLQLPEVSPLALKSNPHIAEELFSQWLSLPDTCRLVKSLLDDAKA
GALINVPGNSTTANATASNSLPSMFPAGSAPPLSPRSTAGSPRVMKQRPGPSFFGSPLKI
VSEPVKEVIPQFYFQNGRPPPNELKEQIMSRINQFFYGHMDGLQVHEFKAVMKEICKLPS
FFSTALFKKIDSNCTQAVTRDAFVDYWVNSNMMTMDLATQIFTILKQPDHMYLTQDDFKP
VLRELLATHPGLEFLQSTPEFQERYAETVIYRIFYYVNRSGNGHLTLRELKRGNLIAAMQ
HADEEEDINKVLRYFSYEHFYVIYCKFWELDMDHDFLIDKENLIRYGNHALTYRIVDRIF
SQVPRKFTSKVEGKMGYEDFVYFMLSEEDKSSEPSLEYWFKCIDLDGNGVLTPNEMQFFY
EEQLHRMECMAQEPVLFEDILCQMVDMIGPENESYLTLRDLKGCKLSGNVFNILFNLNKF
MAFETRDPFLIRQEREDPTLTEWDRFAHREYIRLSMEEDGEDASNGSAEVWDESSLEAPF
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggatatggaactcgtcggggatgtcgctgccctcgacatcgaattgttacagctaccg
gaggtgtctcctttggcgcttaaatcgaaccctcacattgctgaagagttgttctcacag
tggctttcacttccagacacctgtcgactggtaaaatctttgcttgatgatgcaaaggca
ggtgctttgataaatgtccctggtaactcgacgacagcaaatgccactgcaagcaattca
ttgccttcgatgtttcctgctggcagtgcacctccactttcaccgagaagcactgctggt
tctcctcgtgttatgaaacagagacctggtccttctttttttggttctcctctaaaaata
gtcagtgaaccagtgaaggaagtcattcctcaattttactttcaaaatggccgccctcca
ccaaatgagctgaaagagcagattatgtctagaatcaatcaatttttttatggtcacatg
gatggactgcaagttcatgaatttaaagcagtaatgaaagaaatctgcaagctaccatca
tttttctccactgctcttttcaaaaagattgattctaattgcactcaggctgtaacaagg
gatgcctttgttgattattgggtcaatagtaacatgatgacaatggatttagcaacacaa
atatttacaattttaaaacaaccagatcatatgtacctcactcaggatgatttcaaacct
gtcctgcgagaacttttggcaactcatccagggttggaattcttacaaagcactcctgag
tttcaggaaagatatgccgaaactgtcatatacagaatattttactatgtcaatagatca
gggaatggccatcttaccctcagggagctgaaacgtggaaatctaattgcggcaatgcaa
cacgcagatgaggaagaggatattaacaaagttctgaggtacttttcatatgaacatttt
tatgtgatatattgcaagttctgggagctggatatggatcatgatttcttgattgacaaa
gagaatcttattagatatggtaaccatgctcttacttacaggattgttgatcgaatattt
tcacaggttccaagaaagttcacaagcaaggttgaagggaaaatgggttacgaagatttt
gtttacttcatgctttcagaggaggataaatcatctgagcctagtcttgagtattggttc
aagtgtatagatttggatggaaatggagttctcactcctaatgaaatgcagttcttttat
gaggaacagttgcatcggatggaatgtatggcccaagaacctgtgctttttgaggatatt
ttatgccagatggttgacatgattgggccagagaatgagagttatttgacattgcgtgac
ttaaagggctgcaaactttctggaaatgttttcaacattctattcaatcttaataagttc
atggccttcgaaactcgtgatccatttcttattcgtcaggaacgggaagatccaactttg
acagagtgggaccgctttgcccatagagaatatataaggctttcaatggaagaagatggt
gaggatgcctccaatggaagtgcggaagtttgggacgagtcatcacttgaagctcccttc
tga
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