Telopea speciosissima (New South Wales waratah): 122642474
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Entry
122642474 CDS
T07910
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1-like
KO
K14411
RNA-binding protein Musashi
Organism
tss
Telopea speciosissima (New South Wales waratah)
Pathway
tss03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
122642474
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tss03019
]
122642474
Messenger RNA biogenesis [BR:
tss03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
122642474
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
122642474
NCBI-ProteinID:
XP_043691908
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All DBs
Position
10:complement(47683601..47688605)
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AA seq
480 aa
AA seq
DB search
MESDLGKLFIGGISWDTNEDRLKEYFKTYGEVVEAVIMKDRTTGRARGFGFVVFADPAVA
ERVVMEKHTIDGRTVEAKKAVPRDDQHILNRNNSSIHGSPGPARTKKIFVGGLASTVTES
DFKKYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEESVEKVLLKTFHELNGKMVEVKR
AVPKELSPGPSRSPLGGYNYGLSRVNSFLTGYTQGYNPSSVGGYGVRMDSRFGPVAGSRS
GFPSFGPPGYGMGLNFEPGMSPSYGGSTNFSASLGYGRGLNPYYSGNSNRFGSPIGYNGG
NGGSGSVLSSASRNVWGNGGLNYATNSASSSSYMGSGSGSIGGGSFGNSGANWGSSPSIL
AQGGGIGSGYSSGNLGYGSGDSSFGLGGGGYGRNSGTSVAPTSSYAASNSGYDGAYGDFY
SGGSVYGDPTWRSASSELDGSGSFGYGLGNATSDVSAKNSAGYVGSYSVTNRQSNRGIAA
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atggaatcggatcttggcaagctcttcatcggtggaatttcttgggacacaaatgaagat
cgtctcaaggaatatttcaaaacttatggggaagtggtggaggctgtcatcatgaaggat
cggaccacaggtcgagctcgtggatttggttttgttgtttttgcagaccctgctgttgca
gagagagttgtaatggaaaaacacacgatagatggtagaacagttgaggcaaagaaggct
gtccctagagatgatcaacacattctgaatagaaacaacagtagcattcatggatcaccg
ggtcctgcccgcacgaaaaagatatttgtaggaggtttagcatccacggttacagagagt
gactttaaaaagtactttgatcagtttgggacaatcacagatgtggtagtgatgtatgac
cacaacacccaaaggccaagaggctttggattcatcacatatgattcagaggaatcggtg
gagaaggtgttgctgaaaacttttcatgaactgaatggcaaaatggttgaagtcaagagg
gccgttcccaaagagttgtccccagggcctagtcgcagtccacttggtggttataactat
ggattgagtagggtgaatagcttccttactggatacactcagggatataatccaagctca
gttggtggctatggagttaggatggatagtagatttggtccagttgctggtagtaggagt
ggctttccctcatttggtcctcctggttatggaatgggtttgaattttgaaccagggatg
agccccagctatgggggcagcacaaacttcagtgctagtcttggctatggacggggattg
aatccatattacagtgggaactcaaacagatttggcagtcctattgggtataatgggggc
aatggaggaagtggttctgttttaagctcagcaagtagaaatgtgtggggtaatggagga
cttaattatgccacaaactctgcaagctctagttcttacatgggttctggaagtggtagc
attggaggaggttcgtttggcaatagtggagcaaattggggttcatctccttctattttg
gctcaaggtggagggattggttctggctattctagtgggaatcttggttatggaagtggg
gatagcagtttcggtttgggtgggggaggatatggaagaaacagtggaaccagtgtggcc
ccaacatcatcatatgctgcatcaaacagtggttatgatggggcatacggagacttttat
agtggtggttcagtttatggagaccccacttggcggtctgcatcttcagagctagatggg
tctggttcgtttggttatgggcttggcaatgcaacatcagatgtttctgctaaaaattct
gcaggctatgttggtagttacagtgtcaccaatagacaatcaaatagaggaatcgctgcc
tag
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