Telopea speciosissima (New South Wales waratah): 122642555
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Entry
122642555 CDS
T07910
Name
(RefSeq) transcription initiation factor IIF subunit alpha-like isoform X1
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
tss
Telopea speciosissima (New South Wales waratah)
Pathway
tss03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
122642555
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tss03021
]
122642555
Transcription machinery [BR:
tss03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
122642555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_alpha
zf-C3HC4_3
DZR_2
Motif
Other DBs
NCBI-GeneID:
122642555
NCBI-ProteinID:
XP_043692000
LinkDB
All DBs
Position
10:complement(46356496..46374147)
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AA seq
540 aa
AA seq
DB search
MSFDLVLKPSCGGCGSNTDLYGSNCKHMTLCLSCGKTMAENHGKCYECGVALTRLIREYN
VRGSSASDRNYFIGRFVSGVPNFSKKKNADNKWSLQKEGLQGRQVTDALREKYKNKPWLL
EDETGQFQYHGQLEGAQSASYYLLMMQGKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM
KNRRKTADGYQRWMMKAANNGPAAFGEVEKIDDKEAGGATGRGRRKASGDDDEGNVSDRG
EEDGDEEEARKNRLGLGKKGGDDDEEGPRGGDLDLDDDDIEKGDDWEHEEIFTDDDEAVG
NDPEEREDLAPEVPAPPEIKQDEEDEDEEDEEEGGLSKSGKELQKLLGRSNGLNDSDGED
DDDDDDMEDEIGLSPVLAPKQKDAPKEEPADISPSKTGPLGSARGTPSASKSTKTKRKSG
GDDAKVSNGAPAKKGRFDNAQESKPSVKDEPLSTPKSSAPPKGSASSAKAGPTPPTGPVT
EDEIRAALLQMAPVTTQDLVAKFKARLKSKEDKTAFADILRRISKIQKTNGSSYVVLRER
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttcgatcttgttttaaagccgtcatgcggcggctgtgggtcgaacactgatctt
tacgggagtaattgtaagcatatgactctctgcttgtcctgcggaaaaaccatggcggag
aaccatggaaaatgttacgagtgtggcgttgcactcacacgattaattcgggagtataat
gtccgaggcagttctgccagcgatagaaattacttcattggtagatttgtgtcaggggtt
cccaatttttctaagaagaaaaatgctgataataaatggtctctccaaaaagaagggctt
caagggcgccaagttacagatgctttgcgggagaagtacaagaataagccttggcttttg
gaggatgagactggccaatttcagtatcatggtcagcttgagggtgcacaatctgcaagt
tattatctgctcatgatgcaagggaaggagttcgttgctattcctgctggttcctggtac
aactttaacaaagttgctcaatataaacaacttaccttggaagaagctgaagagaagatg
aaaaataggaggaaaactgcagatggataccaaagatggatgatgaaagcagcaaataat
ggacctgctgcctttggtgaagtggaaaaaattgatgacaaggaagctggtggggctact
ggacggggacgtaggaaagcatctggtgatgatgatgaaggaaatgtctcggatagggga
gaagaggatggagatgaagaggaggcaaggaaaaatagacttggacttggcaaaaaaggt
ggtgatgatgacgaagaaggtcctaggggaggtgatcttgatttggatgatgatgatatt
gagaagggtgatgattgggagcatgaagaaatattcactgatgatgatgaggctgtgggt
aatgatcctgaggaaagggaagatttggctcctgaagttcctgctcctccagaaatcaaa
caggatgaagaggatgaggatgaagaggatgaagaggagggaggccttagtaaatctggg
aaggagttacaaaagctgcttggacgatccaatgggctaaatgattcagatggtgaagat
gacgacgatgatgatgatatggaagatgagatcggcctttcccctgtactggctccaaaa
cagaaagatgcaccgaaagaggaaccggctgatatcagcccctcaaaaacagggccatta
ggatctgcacgaggaaccccttctgcatcaaagtcaaccaagacaaaaaggaaatcaggt
ggggatgatgcaaaggtttctaatggagcacctgcaaagaaagggagatttgataatgct
caggagtcaaaaccctctgtgaaggatgagccattgtccactcccaagagtagtgcacct
ccaaaaggttcagcttcatctgccaaagctggaccaacaccaccgactggccctgttact
gaggatgaaatcagggctgcattactgcaaatggcaccagttactacacaggatcttgtt
gcgaagtttaaagcaagactaaaatcgaaggaggacaagacggcctttgcggatatcctg
aggcgaatttctaagatacagaagacaaatggatccagctacgttgttttgagagagaga
tga
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