Telopea speciosissima (New South Wales waratah): 122642703
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Entry
122642703 CDS
T07910
Name
(RefSeq) putative RING-type E3 ubiquitin transferase C3H69
KO
K15687
E3 ubiquitin-protein ligase makorin [EC:
2.3.2.27
]
Organism
tss
Telopea speciosissima (New South Wales waratah)
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tss04121
]
122642703
Enzymes [BR:
tss01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122642703
Ubiquitin system [BR:
tss04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122642703
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf_CCCH_4
zf-CCCH
zf-CCCH_4
Torus
zf-CCCH_2
zf-CCCH_RBM22
zf-CCCH_DUS3L
zf-C3HC4
zf-CCCH_3
zf-RING_2
zf-RING_5
RING_XB3-XBAT31
zf-CCCH_9
zf-RING_UBOX
zf-rbx1
zf_Tbcl_2
zf-C3HC4_2
zf-CCCH_PARP12
FANCL_C
IBR_1
zf-ANAPC11
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
122642703
NCBI-ProteinID:
XP_043692196
LinkDB
All DBs
Position
10:58815635..58838059
Genome browser
AA seq
363 aa
AA seq
DB search
MSKRILCKFYAHGACLKGEHCEFSHDWKDQPNNICTFYQRGVCSYGSRCRYDHVKVSRPQ
TSVSSSSTNSRQNLASNFVEVTHPSRTSLSGETTKVPSVPTELSALSRPFFPPYRPAWIQ
DTGDHNFFYDGNGGDSTITQPVDRPICSFAAAGICPRGEKCPHIHGDLCATCGKHCLNPY
RPDERDEHIITCERKKRHLEALKHSQEIECNVCLDRVLSKPTAAERKFGLLSECDHPFCI
SCIRNWRSSSPSSGMDVNTALRACPICRKLSYFVIPSVIWYSTKEEKQEIIDSYKEKLRS
IDCRYFDFGNGTCPFGTSCFYKHAYRDGRLEEVVLRHLGAEDGDTVIAKDIRLSDFLSNL
RLR
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaagaggattctttgcaagttctatgcacatggagcatgtttgaaaggggaacac
tgtgaattttctcatgactggaaggaccaaccaaacaatatatgcaccttctatcagaga
ggagtgtgctcttatggtagtcgatgcaggtatgatcatgttaaagtttctcgtccgcaa
acttcagtttcatcatcgtcaacaaattctcgccagaacctagcttccaattttgttgaa
gtgactcatccttctagaacttccttgagtggggaaacaactaaagtccctagtgttcca
acagagctatcagctttgagcagacctttctttcctccctatagacctgcatggattcaa
gacactggagatcataacttcttttatgatgggaatggtggggactccacaatcactcaa
cctgttgatcggcctatatgttcatttgctgctgctggtatctgtcctcgtggggaaaaa
tgcccacatattcatggggacttatgtgccacgtgtggaaaacattgcttgaatccatat
agacctgatgaaagagatgagcacataataacatgtgaaagaaagaaaagacaccttgag
gcattgaaacatagtcaagaaatagagtgcaatgtgtgtttagatcgtgtgctttcaaag
cctactgctgctgaacggaagtttgggttgctatcagagtgtgatcatcccttctgcata
tcctgtataagaaattggcgtagtagttccccgtcctctggcatggatgttaatactgca
ctgagggcctgcccaatatgccgcaagctttcatactttgttattccaagtgtaatttgg
tattcaacaaaggaagaaaagcaggagatcattgacagctataaagaaaaactcaggtct
attgactgcaggtactttgacttcggaaatgggacatgcccctttgggactagttgtttc
tacaagcatgcttatcgtgatggccgcctggaagaagttgttctgcgacatcttggagct
gaagatggagacactgtaattgctaaagatataaggctttctgatttccttagtaatttg
cgtctaaggtga
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integrated database retrieval system
