Telopea speciosissima (New South Wales waratah): 122642923
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Entry
122642923 CDS
T07910
Name
(RefSeq) U-box domain-containing protein 44-like
KO
K08332
vacuolar protein 8
Organism
tss
Telopea speciosissima (New South Wales waratah)
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tss04131
]
122642923
03029 Mitochondrial biogenesis [BR:
tss03029
]
122642923
Membrane trafficking [BR:
tss04131
]
Autophagy
Cytoplasm to vacuolar targeting (CVT) pathway
Other Cvt associated proteins
122642923
Other autophagy associated proteins
Micronucleophagy
122642923
Mitochondrial biogenesis [BR:
tss03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
122642923
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
ARM_ARMC5
Cnd1
Vac14_Fab1_bd
XMAP215_CLASP_TOG
KAP
HEAT
ARMC9_ARM
ELMO_ARM
Motif
Other DBs
NCBI-GeneID:
122642923
NCBI-ProteinID:
XP_043692472
LinkDB
All DBs
Position
10:complement(11990806..11999050)
Genome browser
AA seq
823 aa
AA seq
DB search
MHQTNFRTFAELLSELLQLADEVASLAKDSETEPEIFTEFAVFVEKFSPILIDLRDNSSV
MDTLSIQKAVESLENELRHARTVIKASNSISSKQVGEIIHDLGRCLGLVLLASLDVSIEI
KEKFGALHKEMMNVRFNASTDHELEFINDLEVKGENDRRIILDINDIALHLKYGNDEEFR
LALSGLRSLISEKMIQNEWVNDESIIPILLNRLPSSKENDRLTIISILKSLLVENDENKG
KMVDVGSLSMLVRSLTQDVEERREAVGLLLALAEVPAVRRRLGRIQGCILMLVAVHNGFD
PHSSQDAGKLLNILSSNTQNVLHMAEAGYFKPLIEYLREGSDMSKILMATALSRMELTDQ
SRAALGEGGAIEPLVKMFSSEKLEAKLSALGALQNLSSLAENVQILINSGIVTSLLQLLF
CVTSVLMTLREPASAILASIAQSESILVNQDVAEKMLPLLNLSSPEIQCNLLRALNSIAS
HSNASKVKFKMKENGALQLLLPFLTDRNTEIRTVALNLLYNLSKDSPGELSEQLEEIHLN
VIVNIVLESVSEDEKAAALGLLSNIPAGNKKATDFLKRANLLAILLSLLGVCTPTSTPTR
RWLVESVAAILIRFTVPSDKKLQQLAAEHGVIPWLVKLLSIGSPTAKCRAATSLAQLSQN
TLHLSKSRALRWLCMPPSGHAFCEVHDGYCFVKSTFCLVKAGALSPLFQILEGEDREADE
TVLGALSTIMQDEIWENGSKFIAKSSGVHALLRVLELGNVKAQEKALWILERIFRMEDNK
VQYGEPAQVLLIELAQKGSPTLKSTIAQILAHLELLQVQSSYF
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atgcatcaaacaaattttagaacctttgcagagcttctttccgagttactccaattggct
gatgaggttgcttcactcgccaaggattccgaaactgaaccagagattttcacagaattt
gctgtttttgtagaaaaattctcacccattcttattgatttaagggataatagctctgtc
atggacacactgtccattcaaaaggcagttgagtcgctagaaaatgagcttagacatgct
aggacagtaatcaaggcttccaattcaatatcatcgaaacaggttggggaaattattcat
gatcttggtagatgtctaggccttgtgcttttggcaagccttgatgtgtcaattgaaatc
aaagaaaagtttggagctttacataaagaaatgatgaatgtaaggttcaatgcaagcact
gaccatgaattggagtttattaatgacctggaagtgaagggggagaatgatagaagaatc
attcttgatattaacgatattgccttgcaccttaaatatggaaatgatgaagaattcagg
cttgcactttctggattaagatcactaattagcgagaagatgattcagaatgaatgggta
aacgatgaaagtattattccaattcttttgaatcgattgccatctagtaaggagaatgat
cggttgactataatttcaatactgaagagccttctagtggagaatgatgaaaacaagggg
aaaatggtggatgttggatccttgtcgatgttggtgcgctctttaacacaggatgttgaa
gagcgtcgagaagctgttgggctcttgctggctctcgcggaagtcccagcagtccgtcgg
aggcttggcagaatacaaggttgtattcttatgttggttgctgtgcacaatgggttcgac
cctcattcttcacaggatgcagggaaattgttgaatattttgtcaagcaacactcagaat
gttcttcatatggcagaggcaggttacttcaagcctctgatagaatatctgagggaaggt
tccgatatgagtaagattcttatggcaacagcactttcaagaatggagcttacggaccag
agtagagctgctcttggtgaaggaggagcaattgaaccccttgtcaaaatgtttagttct
gaaaaacttgaagccaagctctctgcgttgggtgccctgcagaatctgtctagtttggct
gaaaatgttcagattttaattaattcaggcattgtaacatctttgctccagctccttttc
tgtgttacttctgtgctcatgacacttcgagaaccagcttcagccatacttgccagtatt
gctcagtcagaatctatacttgtgaatcaagatgtggcagaaaagatgctcccactttta
aacttgtccagcccagaaattcagtgtaacctcttaagagcactcaatagtattgccagc
cactccaatgcatccaaggttaaattcaagatgaaagaaaatggtgcacttcagcttctc
ctacccttcttaactgaccgaaatacagaaatcagaacagttgccttgaatttactatac
aatctctctaaagattctccaggagagttgtctgaacaactggaagagatccatctcaat
gttatagtaaatattgtcttagaatcagtgtcggaggatgaaaaagctgctgctcttgga
ctattgagcaacatccctgctggcaacaaaaaagcgacagattttctcaaaagggcaaat
ttgctggccattctgctttcattgttgggtgtatgcaccccaacttcaacacccacaagg
agatggttagtcgagagtgttgcggctatattgattcggtttacagttccttcagataag
aaacttcagcaactagctgctgaacatggggtgatcccgtggcttgtgaagttgctctca
attgggtcgccgactgccaaatgtagagctgcaacttcgttagctcagctgtcacagaat
acacttcaccttagcaaatccagagcattgaggtggctttgtatgcctccctctggacat
gcattttgtgaagttcatgatggctactgcttcgtgaaaagcacgttttgtcttgtcaag
gctggtgctctctcaccactattccaaattttggaaggtgaagacagagaagcagatgaa
actgtccttggtgccctttcaactatcatgcaagatgagatctgggaaaatggtagtaag
ttcattgccaaatcatcgggcgttcatgcccttttgagagttcttgaattaggtaatgta
aaggcccaagagaaagcactttggatattggaaaggatttttcgaatggaggataataaa
gtgcagtacggagaacccgctcaagtgttgcttattgaactagcacaaaagggatctcca
accttaaaatcaacaattgctcagattttggcgcatcttgagctcctgcaagttcaatca
agctacttctga
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