KEGG   Telopea speciosissima (New South Wales waratah): 122642991
Entry
122642991         CDS       T07910                                 
Name
(RefSeq) uncharacterized protein LOC122642991
  KO
K10666  E3 ubiquitin-protein ligase RNF5/185 [EC:2.3.2.27]
Organism
tss  Telopea speciosissima (New South Wales waratah)
Pathway
tss04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:tss00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    122642991
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:tss04121]
    122642991
Enzymes [BR:tss01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     122642991
Ubiquitin system [BR:tss04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    122642991
SSDB
Motif
Pfam: zf-C3HC4 zf-RING_2 zf-C3HC4_2 zf-RING_UBOX zf-C3HC4_3 zf-RING_5 zf-C3HC4_4 Prok-RING_4 RING_XB3-XBAT31 zf-ANAPC11 Baculo_IE-1 zf-RING_6 Sina_RING Rtf2 zf-rbx1
Other DBs
NCBI-GeneID: 122642991
NCBI-ProteinID: XP_043692556
LinkDB
Position
10:61244007..61246277
AA seq 457 aa
MGAARDDIMDLDLNLGPSDPLSPNFDPELGPLSAELGDIGERIQQLEAVTVRARHRWRWR
QGLPPEARNIPVEMIVSSGSTGELQIGEGSIAAEDRSTDSNKTCKGNASDILAKALGKSN
DPEKGSGSGREDGGSFFECNICLDIAKKPVLTCCGHLFCWPCLYQWLHIHSDSKECPVCK
GEVTDMNITPIYGRGNDTHEPEKEDEEGLKIPPRPHARRVESLRQWIHRAAQIEDSYFAQ
MIRRLGSRFDVMGEWTPPQDLDAADEMPDMPPNSLSNRIITPGIQPPDRPNSLSILAQMR
RQGSGRYSLLERSFGRPEPEIINLTQGSSGSSEADGIRQLPSLRSVRSQSRRAASVSHLS
SAERLVQAYFLGHPMGRNNTHSPLVEDRDSVSSIAAVIQSENQTLDNTAEIESMISLSSS
SSRRRADASRASYVDSGIPRATRRRSSLKFHSEPRLC
NT seq 1374 nt   +upstreamnt  +downstreamnt
atgggtgcagcgagggacgacattatggatcttgatttaaatctcggcccttctgatccg
ctatcccccaatttcgacccggaattagggcctctatcggctgaactaggagacattgga
gaacgtattcaacaactcgaagcagtcacagtcagggctaggcatcgttggaggtggaga
caagggctcccacctgaggcgaggaatataccggtggaaatgatcgtcagctccggtagc
acgggcgaactgcagattggggagggcagtatagctgcggaggatagatccactgatagc
aataaaacatgcaaagggaatgcaagtgatatactagccaaggcgttggggaagagcaac
gatccagagaagggtagtggtagtggtagagaagatggtggtagtttctttgagtgcaac
atatgcttagacatagctaagaaacctgtcctcacttgctgtggtcatttattctgttgg
ccctgtctttatcagtggttacacattcactccgatagcaaggaatgccccgtgtgcaag
ggagaggtcacagatatgaacattacgccgatttacggccgtggaaatgatacccatgag
ccggagaaggaagacgaggaaggattgaagatccctccaagaccccatgcacggcgggta
gaaagcttaaggcagtggattcatagggctgctcaaattgaggattcttactttgctcag
atgattaggcgacttggaagtaggtttgatgtgatgggggaatggactccacctcaagat
cttgatgctgctgatgagatgccagatatgcctcctaattcattatccaataggattata
actccaggaatccaaccaccagatagacctaattcattatccattctagctcaaatgcgg
aggcagggttcaggccgatattcacttttagaacggagttttggtagaccagagccagag
ataattaatttaacacaaggctctagtggcagctctgaggcagatggcatccggcaactt
ccatccctgcgatctgtgaggtcacaatcacgaagggctgcttcagtttcacacctttcc
tctgctgaaagactggtccaggcatattttcttggacaccccatgggaagaaacaatacc
cattctccactagttgaggacagagattctgtttccagcatcgctgctgttatacagtca
gaaaaccagacattggataacactgcagaaatagagtcgatgatttcactttcctcttca
tcctccagaagaagagctgatgcttctagggcttcatatgtggacagtggaattccacgt
gcaactagacggagaagctcactgaagtttcacagcgagccaaggttgtgctga

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