Telopea speciosissima (New South Wales waratah): 122643407
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Entry
122643407 CDS
T07910
Name
(RefSeq) prolycopene isomerase, chloroplastic isoform X1
KO
K09835
prolycopene isomerase [EC:
5.2.1.13
]
Organism
tss
Telopea speciosissima (New South Wales waratah)
Pathway
tss00906
Carotenoid biosynthesis
tss01100
Metabolic pathways
tss01110
Biosynthesis of secondary metabolites
Module
tss_M00097
beta-Carotene biosynthesis, GGAP => beta-carotene
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
122643407
Enzymes [BR:
tss01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.13 prolycopene isomerase
122643407
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GFIT
Motif
Pfam:
Amino_oxidase
NAD_binding_8
DAO
FAD_binding_2
FAD_oxidored
GDI
Thi4
HI0933_like
GIDA
Pyr_redox_2
FAD_binding_3
GMC_oxred_N
MCRA
Motif
Other DBs
NCBI-GeneID:
122643407
NCBI-ProteinID:
XP_043692968
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Position
1:18536584..18545391
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AA seq
604 aa
AA seq
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MLALTISPSSSMTELGFRSASPRHKFPLFPRSNTLQLSCFKPRNQKLGFHNGRRSEILKL
SVNLKSLMSVEKPVEKDGSRGASEEKYDAIVIGSGIGGLVAATQLAVKGAKVLVLEKYVI
PGGSSGFYQRDGYTFDVGSSVMFGFSDKGNLNLITQALAAVGCKMQVIPDPTTVHFHLPD
NLSVQVHREYNDFIADLTNKFPHEKEGILKFYGECWKVFNALNSLELKSLEEPLYLFGQF
FQKPLECLTLAYYLPQNAGDIAQKFIRDPKLLSFIDSECFIVSTVKASQTPMINASMVLC
DRHFGGINYPVGGVGGIAKSLAKGLVDKGSKILYRANVTGIILEHGKAVGVRLSDGREFF
SKTVISNATRWDTFGKLLKGEDLPKEEEDFQRVYIKAPSFLSIHMGVKAEVLPPDTDCHH
FVLESDWTRLEEPYGSIFLSIPTVLDPSLAPEGCHILHIFTTSSIEDWKDLPQKDYEAKK
ELVADDIISRLESKLFPGLKSSIVFKEVGTPKTHRRFLARDNGTYGPMPREIPKGLLGMP
FNTTAIDGLYCVGDSCFPGQGVIAVSFSGIMCAHRVAADIGLEKRSPVLDAALLRLLRWF
RTIA
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgcttgctctcaccatctctccctcctcgtcaatgaccgagctagggtttcgctctgcc
tctccgcgacataaatttccgctcttccctcgctcaaatacactacaactctcttgtttc
aagccgaggaaccagaagttagggtttcataatgggcgtaggagcgaaatattgaagttg
tctgtgaacctgaagtctctgatgagtgttgagaagccggtcgagaaagatgggagtagg
ggtgcgagtgaggagaaatatgacgctattgtcatcgggtccggaattggtggactggtt
gctgcaactcagctggcggtgaagggagcgaaggtgctggtgctagagaagtatgtgatt
cctggtgggagttcagggttttatcagagggacgggtatacatttgacgttggatcgtct
gtgatgtttggattcagtgataagggaaatttaaatttgataacccaggcattggcagca
gtggggtgtaagatgcaggtgattcctgatccaaccactgtccattttcatctacctgat
aatctgtccgtacaagtacacagagagtacaatgacttcattgcagacctcaccaataaa
tttccccatgaaaaggaagggatcctcaaattttacggcgaatgttggaaggtcttcaat
gccttgaactcactggaattgaagtcacttgaggagccactctacctttttgggcaattc
tttcagaagcccctggaatgcttgactctggcttactatttgcctcagaatgctggagac
attgctcagaagtttataagggatcccaaattgttgtctttcatagattctgagtgtttt
atagtgagcacagttaaagcttcacagacaccaatgatcaatgcaagcatggttctatgt
gacaggcattttgggggaatcaactacccggttggtggtgttggtggaattgcaaagtcc
ttggcaaaaggactggttgataagggaagtaaaatactttacagggcaaatgttaccggc
attatacttgagcatgggaaggctgtaggagtaaggctttcagatggaagggagttcttt
tccaaaactgtaatatcaaatgcaactagatgggataccttcggtaaacttttaaaagga
gaagatcttccaaaagaggaggaagactttcaaagagtttatattaaggccccatcattt
ctttccattcacatgggtgtgaaagcagaggtgttgccaccagatacagattgccatcat
tttgttcttgagagtgattggacacggttggaggagccatatggtagcatatttttgagc
attccaactgttttggatccatcgttggctccagaaggatgccatattcttcatatattt
acaacatcttccatagaggactggaaggacctccctcaaaaagattatgaagccaaaaag
gagcttgtggcggatgacatcataagcagactagaaagtaaactttttccagggcttaaa
tcatccattgtttttaaagaggtagggacacccaagacgcataggcgattccttgctcgt
gataatggtacctatgggcctatgccacgtgaaatccctaagggcttgttggggatgcca
ttcaatacaacagctatagatggactctactgtgttggtgatagctgctttccagggcaa
ggagttatagctgtttccttttcaggaatcatgtgtgctcatcgagtagctgctgatatc
gggcttgagaaaagatctccggtattggatgctgcccttcttagacttcttcgctggttc
aggacaattgcttga
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