Telopea speciosissima (New South Wales waratah): 122643605
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Entry
122643605 CDS
T07910
Name
(RefSeq) LOW QUALITY PROTEIN: beta-adaptin-like protein C
KO
K12392
AP-1 complex subunit beta-1
Organism
tss
Telopea speciosissima (New South Wales waratah)
Pathway
tss04142
Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
122643605
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tss04131
]
122643605
Membrane trafficking [BR:
tss04131
]
Endosome - Golgi transport
Others
AP-1 complex
122643605
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Adaptin_N
Cnd1
B2-adapt-app_C
HEAT_2
HEAT
Alpha_adaptinC2
HEAT_EZ
PDS5
Atx10homo_assoc
HEAT_spiro
Arm_2
Motif
Other DBs
NCBI-GeneID:
122643605
NCBI-ProteinID:
XP_043693152
LinkDB
All DBs
Position
10:complement(49874764..49895316)
Genome browser
AA seq
907 aa
AA seq
DB search
MSGHDSKYFSTTKKGEIPELKEELNSQYKDKKKDAVKKVIAAMTVGKDVSSLFTDVVNCM
QTENLELKKLVYLYLINYAKXQPDLAILAVNTFVKDSQDPNPLIRALAVRTMGCIRVDKI
TEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINSELVEDRGFLDTLKDLISDNNPMVVA
NAVAALAEIQENSSRPIFEITSATLSKLLTALNECTEWGQVFILDALSKYKAADALEAEN
IVERVTPRLQHANCAVVLSAVKMILQQLELITSTDVVRNLCKKMAPPLVTLLSADPEIQY
VALRNINLIVQRRPTILAHEIKVFFCKYNDPIYVKMEKLEIMIKLASDRNIDQVLLEFKE
YATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIKIKVNYVVQEAIIVIKDIFRR
YPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAERIDNADELLESFLESFPEEPALV
QLQLLTATVKLFLKKPTEGPQQMIQVVLNNATVETDNPDLRDRAYIYWRLLSTDPEAAKD
VVLAEKPVISDDSNQLDPSLLDELLANIATLSSVYHKPPEAFVSRVKTAIQRPEDDEYPE
GSETGYSESPSHAVEGGSSAPTSSNNTPYAATRQPVPAPAPAPPPPVPAAPVPDLLGDLI
GLDNALVPVDEPTTPAGPPLPVLLPASSGQGLQISGQLTRRDGQIFYNLLFENNSQITVD
GFMIQFNKNTFGLAPAGPLQVPQLQPGSSARTLLPMVLFQNLSPGPPSTLLQIAVKNNQQ
PVWYFNDKISLLVFFSEDGRMERAHFLETWKSLPDSNEVTKDLPGAVVNSVEATLDRLAA
SNMFFIAKRRHANQEVLYLSAKIPRGIPFLIELTAVVGIPGVKCAIKSPNPEMASLFFEV
METLLNG
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atgagtggacacgactcaaaatacttctctacaaccaaaaagggagaaatccctgaactc
aaagaagagctcaattctcagtataaggataagaaaaaggatgctgtaaagaaggtgatt
gctgctatgacggttgggaaagatgtttcctcgttgtttactgatgtcgtgaactgcatg
caaacagagaatctcgagctgaagaaacttgtttatttgtatttgataaactatgctaaa
nagcaacctgacctagcaatacttgctgtaaatacctttgtgaaggattcacaggatccg
aatcctttaattcgtgcattagctgtacggacaatgggatgcatccgtgttgataaaatc
acagaatacctgtgtgatccccttcagagatgtctcaaggatgatgatccgtatgttaga
aagacagcggccatttgcgtggctaaactttatgatataaattctgagcttgtggaagat
aggggatttttggatactctcaaggatttgatttcagacaataatccaatggtcgtggca
aatgctgtggctgcccttgcagagatccaagagaatagtagtagaccaatatttgagatc
acaagtgctacactttcaaaactcttgactgctctgaatgagtgcactgaatggggtcaa
gttttcatactagatgccctttccaagtacaaggcagctgacgctcttgaagctgaaaat
atagtggagcgagttactccaagactgcaacatgcaaattgtgcagtcgtactttcagct
gttaagatgatccttcaacaattggaactcattactagcaccgatgtggttcgaaatctt
tgcaagaaaatggctcctcctcttgtaacactactttcagcagaccctgagatacagtat
gttgcactgaggaacatcaaccttattgtacaaaggcggcctacaatccttgctcacgaa
atcaaggttttcttctgcaagtataatgatccaatttatgttaagatggaaaaattagag
attatgataaagcttgcatctgatcggaacatagaccaggttctgttggagttcaaagag
tatgcaacagaggtagatgtagatttcgttagaaaggctgttcgtgctattggccgatgt
gcaataaaattagagagagcagctgagcggtgtataagtgttttgcttgagctgattaaa
ataaaagtaaactatgtggtccaggaggctattatagtcatcaaagatatctttagacga
tatccaaacacttatgagtccatcattgcaacactctgtgagagcttagacactctagat
gaacccgaggcaaaggcatcaatgatctggattattggtgaatatgcagaaagaattgat
aatgccgatgagctccttgaaagcttcttagagagtttccctgaagagcctgccctagtg
cagttgcaattgcttactgcaacagtcaaactgtttcttaagaagccaactgagggccct
caacagatgattcaggttgttcttaacaatgcaactgtggaaacagacaatccagatctg
cgggaccgtgcctacatttattggcgccttctttcaactgatcctgaggcagcaaaagat
gttgtgttagctgaaaagcctgtgatcagtgacgattcaaaccaactggatccttccctg
cttgatgaacttctggcaaacattgcaactctttcttctgtttatcataagcccccagag
gcatttgtgagccgtgttaaaactgcaatccagaggccagaggatgatgaatatccagaa
ggaagtgagacaggctattctgaatccccttctcatgctgttgaaggtgggagttcagca
ccaactagttcaaataatactccatatgctgcaacaaggcagcctgtacctgcacctgct
cctgcaccaccaccaccagtccctgctgctccagtgccagacttacttggtgacttgata
ggcctggataatgcactagttcctgtggatgaacctacaacaccagctggccctccttta
cctgttctactaccagcttctagtggtcaaggtctgcagatcagtggacagcttacacgt
cgagatggacagatattttacaatttgttatttgagaacaattcacagatcactgttgat
ggtttcatgattcagttcaacaagaatacattcggtcttgcacctgctggacccttgcag
gtaccgcaattgcaacctgggtcatcagcaaggacgcttctgcctatggtgttgttccag
aatctctctcctggtcctccaagcacccttttgcagattgccgtgaaaaataatcaacag
ccagtgtggtacttcaatgataaaatttcattgctagtgttcttctctgaggatggtaga
atggagcgtgcacacttccttgagacatggaagtccctaccagattcaaatgaggtcaca
aaggacttgccaggagctgtggtgaacagcgtggaggccactcttgaccgcctggctgca
tccaacatgttttttattgccaagcggaggcatgcaaaccaggaggtgttgtatctctca
gcaaagatccctcggggaattcctttcttgattgaactcacagcagtagttggcatccct
ggtgtgaagtgtgcgatcaagtcaccaaaccctgaaatggcatcactgttttttgaagtg
atggagacacttctcaatggctga
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