Telopea speciosissima (New South Wales waratah): 122643927
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Entry
122643927 CDS
T07910
Name
(RefSeq) transcription initiation factor IIB-like
KO
K03124
transcription initiation factor TFIIB
Organism
tss
Telopea speciosissima (New South Wales waratah)
Pathway
tss03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
122643927
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tss03021
]
122643927
Transcription machinery [BR:
tss03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
122643927
Prokaryotic type
Archaeal type
TFB
122643927
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Ribosomal_S27e
RB_B
Zn_ribbon_8
DUF7573
DmmA-like_C
Motif
Other DBs
NCBI-GeneID:
122643927
NCBI-ProteinID:
XP_043693439
LinkDB
All DBs
Position
10:complement(9800467..9813889)
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AA seq
311 aa
AA seq
DB search
MDVYCSDCKKNTEVVFDHSAGDTVCSECGLVLEAHSIDETSEWRTFANESGDNDPVRVGG
PSNPLLTDGGLSTVISKPNGASGDFLSSSLGRWQNRGSNPDRSLILAFKTIATMSDRLGL
VATIKDRANEIYKKVEDQKSIRGRNQDAILAACLYIACRQEDKPRTVKEICSVANGATKK
EIGRAKEYIVKLLEVEMGQSMEMGTIHAGDFLRRFCSHLGMTNQAVKAAQEAVQKSEELD
IRRSPISVAAAVIYMITQLSDDKKLLRDISLATGVAEGTIRNSYKDLYPFASRLIPNWYA
KEEDLRNLCSP
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atggacgtgtactgctccgattgtaagaaaaacacagaggtggtgttcgaccactctgcc
ggcgacaccgtttgttctgaatgtggcctcgttcttgaagcccactccatcgatgagact
tccgagtggagaaccttcgccaacgagtccggagacaacgatcctgttcgtgtcggtggc
ccttctaaccctctcctcaccgatggtggcctttccaccgtcatctccaagcctaacggc
gcttccggtgacttcctctcttcttccctcggtcgttggcagaatcgaggttcgaatcct
gatcgatcgcttatcctcgccttcaaaaccatcgccaccatgtccgacaggctgggcctt
gtggcgacaattaaggaccgggccaatgagatatacaagaaggtggaagatcaaaagtct
attagaggaagaaatcaggatgcaattttggctgcttgcctgtatattgcttgtcgccaa
gaagacaaacctcgcactgtaaaggaaatttgctctgttgccaatggtgccacaaagaag
gaaattggccgggcaaaagaatacattgtgaaactactggaggtagagatgggtcaatca
atggagatgggaactattcatgcgggagattttctgaggcgtttttgctctcatttgggc
atgactaatcaagcagttaaagctgcccaagaagctgttcagaagtccgaagagctggac
atcaggagaagccccatctcagtggcagcagctgttatttacatgattactcaactctca
gatgataagaagcttcttagagatatttcgcttgcaactggagtagcggagggcaccatc
aggaattcctataaagatctttatccctttgcttccaggttgataccaaactggtatgcg
aaggaggaggaccttaggaacctctgcagcccttaa
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