KEGG   Telopea speciosissima (New South Wales waratah): 122644063
Entry
122644063         CDS       T07910                                 
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 8B-like
  KO
K03016  DNA-directed RNA polymerases I, II, and III subunit RPABC3
Organism
tss  Telopea speciosissima (New South Wales waratah)
Pathway
tss03020  RNA polymerase
tss03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:tss00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    122644063
  09124 Replication and repair
   03420 Nucleotide excision repair
    122644063
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tss03021]
    122644063
   03400 DNA repair and recombination proteins [BR:tss03400]
    122644063
Transcription machinery [BR:tss03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     122644063
  RNA polymerase III system
   RNA polymerase III
     122644063
  RNA polymerase I system
   RNA polymerase I
     122644063
DNA repair and recombination proteins [BR:tss03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      122644063
SSDB
Motif
Pfam: RNA_pol_Rpb8 RNA_pol_RpbG
Other DBs
NCBI-GeneID: 122644063
NCBI-ProteinID: XP_043693598
LinkDB
Position
10:complement(57230397..57240989)
AA seq 145 aa
MVELLFEDIFTVTRLDPDGKKFDKVSRIEARSEQFDMYMQLDVNTEIYPLHVGEKFTMVL
ANTLSLDGTPNTGYFTQGNRKSLADKFEYVMHGKLYKISEEGSGANVKVEMYVSYGGLLM
MLKGDPSNAANFELDQRLFLLMRKV
NT seq 438 nt   +upstreamnt  +downstreamnt
atggttgagcttctttttgaggatatttttactgtgactcggttggatccagatggtaaa
aagttcgataaagtttctcgcattgaagcacggagcgagcagttcgatatgtacatgcag
ctagatgtgaatacagaaatatatcctcttcatgttggagagaaattcacaatggtactt
gctaatacattaagtttggatggaactcctaatactggttattttactcagggaaatagg
aagtcactagccgataaattcgaatatgtcatgcatgggaagctgtacaagatctcagag
gaaggctctggagccaatgttaaagtggagatgtatgtttcgtatggtggccttctgatg
atgctgaagggggatccttccaatgctgccaattttgagttggaccaaaggttgtttctc
ctgatgagaaaagtctga

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