Telopea speciosissima (New South Wales waratah): 122644192
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Entry
122644192 CDS
T07910
Name
(RefSeq) E3 ubiquitin-protein ligase SIRP1-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
tss
Telopea speciosissima (New South Wales waratah)
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tss04131
]
122644192
04121 Ubiquitin system [BR:
tss04121
]
122644192
Enzymes [BR:
tss01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122644192
Membrane trafficking [BR:
tss04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
122644192
Ubiquitin system [BR:
tss04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122644192
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-ANAPC11
zf-RING_10
zf-C2HC5
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
122644192
NCBI-ProteinID:
XP_043693738
LinkDB
All DBs
Position
10:complement(62953029..62955162)
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AA seq
341 aa
AA seq
DB search
MGEVLDARYWCHMCSQIVNPVMEVEIKCPFCESGFVEEMDRRRDRDSGDNDLGSDRALSL
WAPILLGMMGSGPRRRRFRREEGDDDSQRGESEQERVIESILRRRRRSSAAILELLQGLR
AGITSESDNSESDRERERERVILINPFNQAVILQGSFDLNQSDSQSQNASGSLGDYFIGP
GLDLLLQHLAENDPNRYGTAPAQKEAVEAMPTVKIEESMQCSVCLEDFELGAEAKEMLCK
HRFHNGCILPWLELHSSCPVCRFQMPADESKLDSDAFMNRDNRVESSSGSSGHGTDRSGG
EGSEGGNGNGRRSWVSIPWPFNGLFSLSGSQSGGNDSSESS
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgggggaagtgttggatgctagatattggtgtcatatgtgctctcaaattgtgaaccct
gtcatggaagttgagatcaaatgtccattctgcgagagtggttttgtggaagaaatggat
aggagaagagaccgtgatagtggtgacaacgatttgggttctgaccgagcactctccctt
tgggctcccatcttgctgggaatgatgggtagtggtcctcgacgccgaagattcagaaga
gaagaaggcgacgatgacagtcaacggggagaatcagaacaagagagggtgatagaatcc
atccttaggaggaggagaagaagctcagctgccatccttgaattgctccaaggccttcgt
gctggaatcacatctgaatctgacaattcagagagcgatagggaaagagaacgagaacgt
gttatcctaatcaatcctttcaaccaggcagtaattctgcagggctccttcgacctgaac
caatctgatagccagagtcaaaatgcttctggttccttgggtgattacttcattggacct
ggtttggatctattgctgcagcacttggcagagaatgatccaaacagatatggaaccgca
ccagcacagaaagaggcagttgaagcaatgcctactgttaaaattgaggagagcatgcag
tgttcggtatgcttagaggattttgaactaggtgcagaagccaaggagatgctgtgtaag
catagattccataatggttgtattctgccttggctggagcttcatagttcttgcccagtt
tgtaggtttcagatgccagctgatgaatccaagcttgattcagatgcattcatgaatagg
gataacagggtggagagcagcagtggtagcagtggccatggcactgatcgaagtggtgga
gagggaagtgaggggggaaatgggaatgggagaaggtcttgggtttccattccatggcct
ttcaatgggttgttttctttatcaggatctcagagtggtgggaatgattcttcagaatca
tcttaa
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