Telopea speciosissima (New South Wales waratah): 122644266
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Entry
122644266 CDS
T07910
Name
(RefSeq) guanine nucleotide exchange factor SPIKE 1
KO
K21852
dedicator of cytokinesis protein 6/7/8
Organism
tss
Telopea speciosissima (New South Wales waratah)
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tss04131
]
122644266
Membrane trafficking [BR:
tss04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
122644266
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHR-2_Lobe_A
DOCK-C2
DHR-2_Lobe_C
DHR-2_Lobe_B
TPR_DOCK
Motif
Other DBs
NCBI-GeneID:
122644266
NCBI-ProteinID:
XP_043693842
LinkDB
All DBs
Position
10:63310521..63475294
Genome browser
AA seq
1837 aa
AA seq
DB search
MEELSANGHRFRRVLRESFDANMELDPLLNEELDQWPHLNELVQCYKADWVKDENKYGHY
ESIAPISFQSQIFEGPDTDMETEMRLASIRHSKVEDAIDDDIPSTSGRQSSEHFGESPLY
AYEPAFEWENERSLIFGQRTPEIHPQQYSSGLKISVRVLSLLFQAGLVEPFYGTICLYNR
ERREKLSEDFYFHVLPNDMQDGRLSSERRCIFSLDAPSASVCLMIQLEKPAAEEGGVTPS
VYSRREPVHLTEREKQKLQVWSRIMPYREAFAWAIVPLFDNSIAAGAGGATSPSSPLAAS
ISGSSSIESVAEAVAKIPLDGKLAQFSRGSSVIIEVSNLNKVKESYTEDSLQDPKRKIHK
PVKGALRLEIEKLQAAHFDSDSVSDSGSVTNEVIDVGDRYADPTFTKCPSNGSDGSHSGN
CKWNFPDGREAGRNGSNVVPGNSPNFTADVFQAFDFRTLTRSEPFSQLLHFLYVYPLTIS
LSRKRNLFIRVELRKDDADIRRQPLEAMYPRGEGISLQRWAHTQVAVGARVACFHDEIKL
CLPAILTAQHHLLFTFFHIDLQTKLEAPKPAVIGYAALPLSTHIQLQSEISLSIMRELAP
HYLQDSGKERLDYLEDGKAVFGLRLRLCSALYPINERIRDFFLEYDRHTLRTSPPWGTEL
LEAINSLKNVDSTALIQFLHPILNMLLHLIGDGGETLQVAAFRAMVNILTRVQQESSDGA
ERNRFLVNYVDYAFDDFGGRQLPVYPGLSTVWGSLARSKAKGYRVGPVYDDVLAMAWFFL
ELIVKSMALEQSRLFYHTLPSGEDVPPLQLKEGVFRCIMQLYDCLLTEVHERCKKGLSLA
KRLNSSLAFFCYDLLSIIEPRQVFELVSLYMDKFSGVCQSVLHDCKLTFLQIICDHDLFV
EMPGRDPSDRNYLSSVLIQELFLTWDHDDLVLRAKAARMLVVLMCKLEFDARYQKDEDKL
YIAQLYFPLIGQILDEMPVFYNLGVVEKREVLVVIMQIIRNLDDASLVKAWQQSVARTRL
FFKLLEECLILFEHRKPADSTLMGCSSRSPEGEGPISPKYSDRLSPAMNNYLSEASRQEV
RPQGTPENGYLWQRVSPQLSSPSQPYSLREALAQAQSSRIGASSRALRESLHPVLRQKLE
LWEENLSAAVSLLVLEITEKFSTAAASHSIATDYGNLDCITSIFMSFFLRSQPLAFWKAL
FPVFNSVFNLHGATLMARENDRFLKQIAFHLLRLAVYRNDNIRRQAVIGLQILVRSSFCY
FMQTSRLRVMLTITLSELMSDVQVTQMKSDGSLEESGEARRLGKSLQEMAHEASSLCILK
ECGLPENALIAIPDGFTVNRWSWADVKYLSDSLLQALDAGLEHALLTPVMTVDRYAAAES
FYRLAMAYAPVPDLHIMWLLHLCDAHQEMQAWAEAAQCAVAVAGVIMQALVGRNDAVWSR
DHVTALCKICPMVSSEVTAEASAAEVEGYGASKLTVDSAVKYLQLANKLFSQAELYHFCA
SIIELIIPVYKSRRAFGQLAKCHTSLTNIYESILEQESSPIPFIDATYYRVGFYGDRFGK
LDRKEYVYREPRDVRLGDIMEKLSHIYESRIDGDHTLHIIPDSRQVNADELQPGICYLQI
TAVDPVMEDEDLSSRRERIFSLSTGSMRARVFDRFLFDTPFTKNGKTQGGLEDQWKRRTV
LQTKASFPALVNRLLVVKSESLEFSPVENAIGMIETRTAALRNELEEPRSSEGDQLPRLQ
SLQRILQGSVAVQVNSGVLSVCTAFLSGEPTTRLRSQELQQLIAALLEFMAVCKRAIRVH
FRLIGEEDQDFHTQLVNGFQSLTAELSHYIPAILSEL
NT seq
5514 nt
NT seq
+upstream
nt +downstream
nt
atggaagaattgtcggctaatgggcaccgttttagaagagtactacgtgaatcctttgat
gctaatatggaattggacccactgctaaatgaagaattggaccagtggcctcatttaaat
gaactggttcaatgctataaagctgattgggtaaaggatgaaaacaagtacgggcactat
gaaagtattgcacctatctcttttcaaagtcagatatttgaagggcctgatactgacatg
gaaacagaaatgcgtcttgccagcataaggcattccaaggttgaagatgctattgatgat
gacatcccgagtacctcaggaagacaatcatcggagcactttggtgaatctccattatat
gcatacgaaccagcttttgaatgggaaaatgagaggtcattgatctttggtcaaaggact
cctgaaatacatccacaacagtatagcagtggattgaagatctctgtgagggttctgtcc
ttgttgtttcaagcaggactggttgagccattctatggtacaatttgcttgtacaataga
gagagacgggagaaattgtcagaggatttctactttcatgtgctaccaaatgatatgcag
gatggtagactttcttctgagcgacgctgtattttctcattagatgctccatctgcatca
gtttgcctgatgattcaattagagaagccagctgcagaagagggtggtgtcactccttct
gtttattcacgcagagaaccagtgcacttgacggagagagagaaacagaaacttcaagtg
tggtctcgaatcatgccttacagagaggcgtttgcttgggctattgttccactgtttgat
aatagcattgctgcaggcgctggtggagctacttcccccagcagtcctcttgctgctagt
atttctgggtcaagttccatagagagtgttgctgaagctgttgcaaaaatcccattagat
gggaagctggctcagttttcaaggggaagctctgtgataattgaagtatcaaacttaaat
aaggttaaagaaagttatactgaggactcacttcaggatcctaagcggaagatccataaa
ccagtgaagggagctttgagacttgaaattgaaaagcttcaggctgctcattttgactcg
gacagtgtctctgatagtggcagtgtaaccaacgaagtcattgatgttggggatcgatat
gctgaccccacatttacaaaatgccctagtaatggttctgatggttctcatagtggcaac
tgtaagtggaacttccctgatggtcgagaagcaggcagaaatggttcaaatgttgttcca
ggaaatagtccaaacttcactgctgatgtcttccaagcttttgactttcgtactttgaca
agaagtgagccattctcgcaactcctacattttctttatgtatacccattgacaatcagt
ttgagtcggaagaggaatttattcatacgggtggagctgaggaaggatgatgctgatatt
cgtaggcagccattagaggcaatgtatccaaggggtgaaggaatatcgcttcagagatgg
gctcacacacaagttgctgttggtgccagggttgcttgttttcatgatgagattaaactt
tgcctccctgctattttgacagctcaacatcatcttctgtttactttctttcatattgat
cttcaaacaaaacttgaagctccaaagcctgcagtgatcggttatgctgcactccctttg
tccactcacattcagttgcaatctgaaatttctctatcaattatgagagagctggctccg
cactatctccaagatagtgggaaggagaggctggattacttggaagatggaaaagctgtc
tttggattgcgtttaaggctatgctctgctttatacccaattaatgaacgtattcgagat
ttttttcttgaatatgataggcacacacttcggacaagtccaccttggggtactgagctt
ctggaggccatcaacagtttaaagaatgttgattccactgctttaattcagtttctgcat
ccaattttgaatatgcttctccatctcattggcgacggtggtgaaacccttcaggttgca
gccttccgtgccatggtcaatatattaacaagagtgcagcaggaatcatctgatggagct
gaaagaaaccgttttctcgtaaactatgtggattatgcttttgatgactttgggggtcga
caacttccagtttatcctgggctgtccacggtgtggggcagcttagcccgtagtaaggct
aaaggctatcgtgttggtccagtttatgatgatgtcttggcaatggcttggtttttcttg
gagctaattgtaaagtccatggctctggagcagagcaggcttttctatcatactcttcct
tcaggggaagatgttccaccattgcaattgaaagaaggtgtattcagatgtatcatgcag
ctgtatgattgcttgcttacagaagttcatgaacgctgcaaaaaggggttaagcttggca
aaacgtttgaacagcagtttagccttcttttgttatgacctcttgtccattatcgagcct
cgccaagtttttgagctggtgtccttgtacatggacaaattctctggggtttgccaatct
gttttgcatgattgcaagcttacctttttgcagataatatgtgatcatgatctctttgtg
gagatgcctgggagagatccttctgataggaactatctttcatcagttttaatccaggaa
cttttccttacttgggatcatgatgatttagttctgcgagctaaagcagctcgaatgttg
gtggtccttatgtgcaagcttgagtttgatgctagataccagaaagatgaagataaacta
tatattgctcagctatattttccactcattggacagatcctagatgaaatgcctgtcttt
tacaaccttggtgttgttgaaaagcgtgaagtcttagttgtcatcatgcaaattatacgt
aatctggatgatgcatctcttgtcaaggcctggcaacaaagtgttgctcgaaccagatta
tttttcaagctcttggaggagtgcctcattctttttgagcacaggaaaccagctgatagt
acacttatgggctgcagttcacgaagtcctgagggagaaggtcctatttccccgaagtac
agtgataggctctcccctgcaatgaacaactatctttctgaggcatctcggcaagaagtc
agacctcagggaacccccgaaaatggttatttgtggcagagagtcagtccccagttaagc
tccccgagccagccatattccttgagagaagctctagctcaggcacagtcttctaggatt
ggagcttcgtcacgagcattaagagagtccctgcacccagtattgagacaaaaactggaa
ctttgggaagaaaacttaagtgctgctgttagtctcctcgttttggagataactgagaaa
ttttctacagctgcagcatctcatagcattgctaccgattatggaaatttggattgtatc
acttccatatttatgagcttcttcttacgaagtcagccactggctttttggaaggctttg
tttcctgtgttcaacagtgtattcaatctccatggagcaacattaatggcaagggagaac
gaccgcttcctaaagcagattgctttccatcttctccggcttgcggtctatcgaaatgat
aatatcaggagacaggcagtcattggactgcaaatactcgtgaggagttctttctgttac
tttatgcagacaagtaggttgcgggtaatgttgacaattaccttgtcggagttgatgtct
gatgtacaagtgactcagatgaagtctgatggatcacttgaagagagtggcgaggctcgg
cgtctggggaaatcattgcaagagatggcacatgaagcaagtagcctttgcatattaaaa
gagtgtgggcttccagagaatgctctaattgcaattcctgatggttttacagtgaaccgg
tggtcctgggcagatgtgaaatatctatctgacagccttcttcaggcccttgatgctggc
ctagagcacgccctcttaacccctgtaatgaccgtggaccgttatgctgcggccgaaagc
ttctatcgacttgcaatggcatatgcgcctgtcccagatcttcatataatgtggttactg
catttatgtgatgcacatcaagagatgcaggcatgggctgaagctgcacagtgcgctgtt
gctgtagctggtgtgattatgcaggctctcgtgggaagaaatgacgctgtgtggagtaga
gatcatgttacagctttgtgtaaaatatgccccatggtcagcagtgaagttactgctgag
gcttctgcagctgaggttgagggatatggtgcatccaaactcactgttgactctgctgtg
aaatacctacagcttgcaaataagctattctctcaagcagagctctatcatttctgtgca
agcattatagaactcataattccggtttataaaagccggagggcgtttggacagcttgca
aaatgccacacatcattgaccaacatctatgaatctatccttgagcaggaatcgagccca
ataccgttcattgatgccacgtactatcgtgtgggattttatggcgatcgatttgggaag
cttgataggaaggaatacgtgtacagagagccccgtgatgtacgcttgggtgatataatg
gagaaacttagtcatatatatgaatctaggattgatggagatcacactctgcatataatt
cccgattctagacaagtcaatgccgatgagttacaaccagggatctgctatctgcagata
actgcagtcgatcctgtcatggaagatgaggacctgagcagtagaagagaaaggatattc
tctctttccactggaagcatgcgtgcacgtgtcttcgatcggtttctgtttgacacccca
tttacaaaaaatggaaagacacaaggcggcttggaagaccagtggaagcgacgtaccgta
cttcagactaaggcgtccttccctgccctagtaaaccgtcttttggtagtgaaatccgaa
tcccttgagttctcaccagtagaaaatgctattgggatgattgaaacccggacagctgca
ctgaggaatgagctcgaagagcctcgaagctctgaaggagatcaactcccacgtctccaa
agtttacagaggatactccaaggcagtgttgcagttcaggtgaacagtggagtcttgagt
gtgtgcacagcgtttctgtcaggtgagcctacaaccagattgcggtcacaagaactgcag
caactcattgctgcactcctcgaattcatggcagtttgcaagcgtgcaattcgggtccac
ttcaggttaattggggaggaagatcaagacttccacactcagttggtgaatggatttcag
tccctcacagcagagctttctcactacatccctgccatactttctgagctatga
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integrated database retrieval system
