Telopea speciosissima (New South Wales waratah): 122645014
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Entry
122645014 CDS
T07910
Name
(RefSeq) protein RAE1-like
KO
K14298
mRNA export factor
Organism
tss
Telopea speciosissima (New South Wales waratah)
Pathway
tss03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122645014
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tss03019
]
122645014
03036 Chromosome and associated proteins [BR:
tss03036
]
122645014
Messenger RNA biogenesis [BR:
tss03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
122645014
Chromosome and associated proteins [BR:
tss03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
122645014
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_WDHD1_1st
WD40_Prp19
WDR55
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
EIF3I
ANAPC4_WD40
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_HPS5
WD40_MABP1-WDR62_2nd
Beta-prop_IFT140_1st
Beta-prop_IFT122_1st
Beta-prop_BBS7
Motif
Other DBs
NCBI-GeneID:
122645014
NCBI-ProteinID:
XP_043694304
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Position
11:complement(35154648..35204136)
Genome browser
AA seq
359 aa
AA seq
DB search
MSIIVGLSNPNPNKSFEVVQPPTDSVSSLSFSPKGNYLVATSWDNQVRCWEIVGSGAQVG
SVPKASTSHEHPVLCSAWKDDGMTVFTGGCDKQVKMWQLMAGGQPMPVAMHDAPIKEVAW
IPEMNLLVTGSWDITLRYWDTRQPNPVHTQQLPECCYALSVCHPLMVVGTADRNLIVFNL
QSPQAEFKRISSPLTYQTRCVAAFPDHQGFLVGSIEGRVGVHHLDDSQQNKNFTFKCHRD
GNEIYSVNALNFRPVHHAFATAGSDGGFNFLLKFVGTMLLRFMLIQPSLVFQAMSRCSQP
IPCSTFNNDGSIFAYSVCYDWSKGAENHNPAAAKNYIFLHVPQESEVKGKPRLGTSGRK
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgtctattattgtgggactttcaaatccaaatcccaataaatcatttgaggttgttcaa
cctcctactgattccgtttctagccttagcttcagtcccaagggaaattacctagtcgct
acttcttgggataaccaggttagatgctgggagatagtcggttcaggggcccaagttggt
agtgtgccaaaagcatctaccagtcatgaacacccggttttgtgctcggcttggaaggat
gatggaatgacagtgtttactgggggatgcgataaacaagttaagatgtggcaattgatg
gctggtgggcaacccatgcctgtggctatgcatgatgcacctatcaaagaggttgcttgg
attccagagatgaatttgttagttacaggaagctgggacataactctgaggtattgggat
acacgacaacccaatccagttcacactcagcaactccctgagtgctgttatgcactatca
gtttgtcatcctctgatggttgttggcactgctgatcgaaatctgattgtttttaacttg
cagagtcctcaggccgagtttaagagaatcagttcacccctgacgtatcaaacaaggtgt
gtggctgcctttccagatcatcaaggtttcttggttggctcaatagagggacgggtaggt
gttcatcatttggatgattcacaacaaaacaaaaactttactttcaaatgccacagagat
gggaatgagatttactcagtcaatgctttgaatttccgtcctgtacaccatgcttttgca
acagcaggctctgacggtggtttcaattttttgcttaagtttgtggggactatgttgttg
cgttttatgctaatacaaccttctctggttttccaggccatgtctagatgcagtcaacct
attccgtgcagcactttcaacaatgatggttcaatatttgcatactcggtgtgttatgac
tggagtaagggtgcagagaatcataacccagcggcagcaaagaactacattttcctccat
gtcccacaggaatctgaagtgaaaggaaagccgcgtcttggaacctctggtcgaaagtga
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