KEGG   Telopea speciosissima (New South Wales waratah): 122645050
Entry
122645050         CDS       T07910                                 
Name
(RefSeq) DNA repair protein RAD5B
  KO
K15505  DNA repair protein RAD5 [EC:5.6.2.-]
Organism
tss  Telopea speciosissima (New South Wales waratah)
Brite
KEGG Orthology (KO) [BR:tss00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tss03400]
    122645050
DNA repair and recombination proteins [BR:tss03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    122645050
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C UBA_RAD5A zf-C3HC4_3 HIRAN zf-C3HC4 DEAD zf-RING_2 zf-C3HC4_2 ResIII zf-RING_UBOX zf-RING_5 Prok-RING_4 RING_XB3-XBAT31 zf-C3HC4_4 zf-RING_4 Baculo_IE-1
Other DBs
NCBI-GeneID: 122645050
NCBI-ProteinID: XP_043694361
LinkDB
Position
1:30660633..30666946
AA seq 1162 aa
MATIILDEEEKVKMIRSVLGAEVPESEILRAFSLCGNRPDAAISLMLDIPGFLNPPMDVK
RTITSTGARISTQIMEKTPEYSAGADPIKVLEPKAEVKMEEHAMGFEKNPANELETKIRV
KEEQIDVGCVSSNGAQPIKVQVPTVEVKTEEDPPMGSEKNFVNELKRMIRVKEEQIDVGS
KTNPVNVLETNTRIRKIEEPSMYFEKDSMNGLKAKIEVKEEELDKGSEKNPINVLEKVQV
KEKPASSDQGLAIKRQTANTLLRYQPNQRVPSRVEQESTLLSTDVEDGEFPEEPDWFLVG
RTSVTGVSTCKRKRLEFNEIVHFALPKRFSDIVRFSTKRSGEIGRLAMDWAKCILPLVSS
SKVKYRGRFVGTPSVLTLMQEIPLYLSFYVHHSIFGQGDPSSRNLVEPSMQYSTSQPLPS
LFKLLNIKPFQKAEFTPEELDTRKRKLNLKGDSDLTRRKGSQKVGEPNNDEQAISESALN
KLVGTADVYNLEEMEPPATLNCNLKPYQKQALYWMSGLEKGLDVEEAAKTLHPCWSAYRI
SDWRAPSIYMNIFSGEATTQFPSATQMARGGILADAMGLGKTVMTIALILAMRGKGVPSN
QKPITYCVDDEMKISQKKAKTIVKGGTLIVCPMALLSQWRDELEAHSRPGSISVVVHYGG
DKSINPRVFSEPDVVLTTYGVLSTAYKQNPELSILHRVEWFRVVLDEAHTIKSSRTIGAQ
AAFALSSHCRWCLTGTPLQNRLEDLYSLLCFLHVEPWCNWAWWNKFIQRPYENGDERGLR
LIKAILRPLMLRRTKESKDKDGRPILVLPPVEIKTIECVQSDVERDFYDALFRRSKVQFD
KLVAQGKVLHNYANILELLLRLRQCCNHPFLVMSRCDTKTERYVELDKLARRFLEGNSNR
SNLNQIVPTRAYVEEVVEDIRQGKDTECPICLEFPDDHVLTPCAHRMCRECLLKSWPTPE
GGHCPICRTPLKNDDLITCPLDNQFWIDIENWKESCKVLKLLDCLELLSSSGEKSIIFSQ
WTSFFDLLQNPLEKKGIKFLRFDGKVDQKQRERILKEFSETKEKMVLLMSLKAGGVGLNL
TAASNVFIMDPWWNPAAEEQAIMRIHRIGQKRSVCVKRFIVKDTVEERMQEVQARKQRMI
AGALTDVEEQSSRLEDLKMLFR
NT seq 3489 nt   +upstreamnt  +downstreamnt
atggcgacgataatcctagacgaagaagagaaggtcaagatgatccgctcggttctggga
gcggaagtgccagaatcggagatcctccgagcattttcactctgcggaaacagaccagat
gccgctataagcctcatgcttgatatccccgggtttctaaacccaccgatggatgtgaag
cgaacgattacaagcacgggagctcggatttctacccagataatggaaaagacgcctgaa
tattctgccggagctgacccaattaaagtgctggagccaaaagctgaagtgaagatggaa
gagcacgcaatgggctttgagaagaaccctgccaacgaactggagacgaagatcagagta
aaggaggagcaaatcgatgtgggttgtgtaagttccaacggagctcaacccattaaagtg
caggtgccaacggttgaagtaaagacagaagaagaccctccgatgggttctgagaagaac
tttgttaatgagttgaagaggatgatcagagtaaaggaggagcaaatcgatgtgggttct
aaaacgaatcccgtaaacgttctggaaacaaacaccagaataaggaagatcgaagaaccc
agtatgtattttgagaaggattctatgaacggattaaaggcgaagatcgaagtgaaagag
gaagaactcgataagggttctgagaagaaccctataaatgttttggagaaggtacaagta
aaggaaaaaccagcaagttcagaccaaggtctggcgattaaacgacagacggctaacacc
cttcttcgttatcaacctaatcaaagggttccttctcgtgtcgagcaagaaagcactctt
ttgagcacagatgtagaggatggtgagttcccagaagaaccagactggtttctagtgggg
aggacttctgtcacgggggtttctacgtgcaaaaggaagaggctagagttcaatgagatc
gtccattttgccctccctaagagattttcagatattgttcgcttctcaaccaaacgttca
ggggagattgggaggctggcgatggattgggcaaaatgcatcctccctcttgttagttct
tccaaggtgaagtaccgtggtcgttttgtaggcacaccttcggtccttacgctgatgcaa
gaaattccattatacttgagtttttatgtgcatcattcaatttttggccagggggatcct
tcttcgcggaatttagttgaaccctctatgcaatattcgacttctcagcctctcccaagt
ttgttcaaactgttgaatatcaaaccatttcagaaggcagaatttactccagaggagctt
gatactcgaaaacgcaagttaaacctgaaaggggattcagatctcacaagaagaaagggc
agccaaaaggttggtgaaccaaacaatgatgaacaagctatttcagagtcagcactgaac
aagcttgttggtacagcagatgtatacaacttggaggagatggagcctccagccacactc
aattgtaatttaaagccataccagaaacaagctctctattggatgtctggattggagaag
ggcttagacgtcgaggaggcagcaaaaacactacatccatgctggtcagcttatcgtatc
agtgactggagagctccttcaatctatatgaacatcttctcaggggaagcaactactcaa
ttccctagtgctactcagatggctagaggaggaattttagcagatgcaatggggcttggg
aagactgtgatgacaatcgctcttatacttgcaatgcgaggcaagggtgtccccagcaat
caaaagcccatcacatattgtgtagatgatgaaatgaagatctctcaaaagaaggccaaa
acaatagtaaaagggggcactctcattgtctgccctatggcactgttaagccagtggagg
gatgagcttgaagcccattctaggccaggcagtatttcagttgttgtacactatggtggt
gacaagagcattaaccccagagtgttttcagaacctgacgtggtcttgacaacatacgga
gtcttaagtaccgcatacaaacaaaatccagaattaagcattctccacagagtagagtgg
ttcagggtggtgcttgatgaagcacacacaattaaatcatcaaggaccattggtgctcag
gcagcctttgcattatcctcacattgcaggtggtgtcttacaggaactcctctccagaac
cgtttggaagacctctacagccttttgtgtttcttgcatgttgagccatggtgcaactgg
gcatggtggaataaattcattcaaaggccttatgaaaatggcgatgaaagaggtttgaga
ttgattaaggctattcttaggccattaatgctaaggagaacaaaggaatcaaaagacaaa
gatggaaggcccatactggttctcccccctgttgagatcaaaaccattgagtgtgtacaa
tctgatgttgaacgggatttctatgatgccctcttcaggagatcaaaggtccagtttgac
aagttagtggcacaaggcaaggtgctccacaattatgcaaatattcttgagcttctactc
cgattgaggcagtgttgcaaccacccatttcttgtcatgagccgatgtgataccaaaacc
gaacggtatgtagagttggacaaacttgcaaggcggttccttgaaggcaactctaatcga
tccaacctgaatcagatagtcccaactcgagcttatgttgaagaggtcgtggaggatatc
cgtcagggcaaagacactgagtgcccaatctgcttagagtttccagatgatcatgtactc
actccatgtgcacaccggatgtgtagggagtgtttgctcaagagctggccaaccccagaa
ggaggtcattgcccaatttgtaggacgccgttgaagaacgatgacctcataacatgccca
ttggacaatcaattctggattgatattgagaactggaaagaatcatgcaaggttttgaag
ctccttgattgcctggagcttttatccagttccggtgaaaagagcattatctttagccag
tggacttcattttttgatctgttacagaaccctctggagaagaaaggaattaagttctta
aggtttgatggaaaagtggatcagaagcaaagggagaggatcttaaaggagtttagtgag
accaaagagaaaatggtgttgttgatgtcattgaaagctgggggtgtaggtttaaatttg
actgcagcatctaatgttttcataatggatccatggtggaatcctgcagcagaggagcaa
gccataatgagaattcatcggattgggcaaaaacgaagtgtttgtgtgaaaagattcatt
gttaaggatacagtggaggagcggatgcaagaggtccaagcaaggaagcaacggatgata
gcaggagctctcactgatgtggaagaacaatccagcaggcttgaggatctgaaaatgctt
ttcagatag

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