Telopea speciosissima (New South Wales waratah): 122645116
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Entry
122645116 CDS
T07910
Name
(RefSeq) uracil-DNA glycosylase, mitochondrial
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
tss
Telopea speciosissima (New South Wales waratah)
Pathway
tss03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
122645116
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tss03400
]
122645116
Enzymes [BR:
tss01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
122645116
DNA repair and recombination proteins [BR:
tss03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
122645116
Prokaryotic type
122645116
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
CBM77
LED_rpt
Motif
Other DBs
NCBI-GeneID:
122645116
NCBI-ProteinID:
XP_043694397
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All DBs
Position
11:41853284..41875187
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AA seq
402 aa
AA seq
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MVNEDLYCCKTYGMDDEKVKVFGCPRTRIAKEGDRVQFYIPFFSPRLATQPIGTPIFFVM
FRVLYLGPFFPLSHSLNLAMASSKALTEFFQPAKRLKVLPSAETLSSKPIISVLCHTSAS
ESDKSGDGGLRSDSPSSLTIEQKTRIEFNKSLARSKLNLRICTERISKSKADGVDYVKLE
DLLVEETWLEALTGELQKPYAKNLCKFVEREMRGSVPIYPPSHLIFNALNSTPFDRLKVV
IIGQDPYHGPGQAMGLAFSVPEGVKAPSSLVNIFKELQQDLGCSIPSHGNLERWAIQGVL
LLNTVLTVRHHDANSHAKKGWEPFTDAVIHTISEKKSGVVFLLWGNSAQKKSSLIDESKH
HILRAVHPSGLSANRGFFGCRHFSKTNQILEKMGVLPINWQL
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atggtgaatgaggacctgtactgttgtaagacctatggaatggatgatgaaaaagttaag
gtttttggttgtccaagaacacgaatcgcaaaagagggcgatagggtacagttttacatt
cccttcttttcgccaagattagctactcaacccatcggaacacccattttctttgtaatg
ttccgggtattgtatctgggacccttcttccccctctctcattctctgaacttggcaatg
gcttcttccaaagccctaacggagttcttccaacccgccaaacgattgaaggtccttcca
tccgccgaaaccctatcttccaaacccatcatctccgttctctgccacacttctgctagc
gaatctgacaagagcggcgatggtggtctccgaagcgactctccttccagtctcaccatc
gagcagaaaacccggattgaatttaataaatctctcgcaagatcgaaactcaacctcaga
atctgcaccgagagaatctctaagtccaaagctgatggagtggattatgtgaaacttgag
gatcttctggttgaggagacctggttggaagctcttactggagagcttcagaaaccctat
gcgaagaatctgtgcaaatttgttgaacgtgaaatgcgtggcagtgtaccaatctacccg
ccttctcatctaattttcaatgctcttaattcaacccctttcgacagactcaaagttgtg
atcattggccaggatccttatcatggacctggtcaagcaatgggccttgctttctcagtg
ccagagggagtcaaggccccttctagtctggttaacatattcaaggagcttcaacaagat
ttgggctgttctattccctctcatgggaatttagaacgttgggcaatacagggtgtttta
ttgcttaacactgtactcactgtgagacatcacgatgctaattctcatgcaaagaagggg
tgggaaccattcactgatgcggttatccatacaatctctgaaaagaaaagtggagttgtt
tttcttctttggggaaactctgctcaaaagaagtcaagtttgattgatgagtcaaagcac
cacattctcagagctgttcatccttctggcttatctgcaaacagagggttctttggctgc
aggcatttttctaaaacaaatcagattttggagaaaatgggtgttctccccatcaattgg
caactatag
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