Telopea speciosissima (New South Wales waratah): 122645686
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Entry
122645686 CDS
T07910
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 23 isoform X1
KO
K15166
mediator of RNA polymerase II transcription subunit 23
Organism
tss
Telopea speciosissima (New South Wales waratah)
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tss03021
]
122645686
Transcription machinery [BR:
tss03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Other mediators
122645686
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med23
Motif
Other DBs
NCBI-GeneID:
122645686
NCBI-ProteinID:
XP_043694949
LinkDB
All DBs
Position
11:51493324..51597940
Genome browser
AA seq
1613 aa
AA seq
DB search
MDQNQRTNRAYQFHPARAAIIDLFNLYLGRNPRQKLDDAVREPPNKTQKRVTALNRELPP
RNEQFLFDFERLQSQFPDQEQLRAMTESVLISLVVQCCSHAPRAEFILFAIRSLCNIGYV
NWDSFLPNLLSSISTAEASYGQGNQAVGAVSSSNLSQSGIGPSSSTVTNPTNFQPSNPTS
PLPSIHGMGSPGQSATEPASCATLSPVKSSDVSCTGQHISRANPSLTDNSISCLRQLSCT
IILAGIESNLKPVTYADIFSHMLNWLVNWDQRQQGLDECDGSKAWKPDRALNEWLHSCLD
VIWLLVEEDKCRVPFYELLRSGFQFVENIPDDEALFTLILETHRRRDMVAMHMQMLDQHL
HCPTFGTHRFITQAYQNISGEQVANVRYVPITYPSVLGEPLHGEDLANSIQRGSLDWERA
MRCLRHALHTTPSPDWWRRVVLLAPCYRQPGQQVSTPGSVFSSEMICEATIDRIMELLKL
TNSDTHCWQDWLIFSDVFFFLMKNGCIDFTDFVDKLASRITKGENQILRSNHVTWLLAQI
IRIEIVTNALSTDPRKEIVTNASSTDPRKVETTRKMLSFHREDRNSDPSTGGPQSILLDF
ISSSQTLRIWSFNTSIREFLSHEQLQKGKQIDEWWKQVTKGERMLDFMNMDDRSIGMFWV
LSHTMAQPACDALVSWLVAPGVQELLPGSNVQGGERVMMMRETNPLPISLLSGLSINLCL
KLAYQIEDSLFGGQVIPSLAMVETYSRLLLIAPHSIFRPHFTALTQRNPSIFNKPGVSLL
LLEILNYRLLPLYRYHGKSKTLMYDVIKIISMLKSKRGDHRVFRLAENLCMNLILSLRDF
FLVKKELKGPTEFTETLNRITMINLAITIKTRGIAEVEHMLFLAPLLEQITATSQHMWSE
KTLRYFPPVIREALMGRVDKRAQAIQAWQQAETTVINQCTQLLSPSADPSYVMTYISHSF
PQHRQYLCAGAWMLMHGHLENINSANLARVLREFSPEEVTSNIYILVDVLLHHIHVELQR
GHLLQDLLLKASANLSFFIWTHEILPLDILLLALIDRDDDPHALRIVISLLDRQELQQRV
KLFLNRGSPEHWLNSGIFKRVELQKALGNHLSWKDRYPPFFDDIAARLLPVIPLIVYRLI
ENDATDIAEKVLVVYSSFLAYHPLRFTFVRDILAYFYGHLPSKLILRILNVLDLSKIPLS
ESFPQHIASSNPATCPPPDYFATLLLGLVNNVIPPLHSKSKCMGDISNNSVRGPHNKTPA
SSQSVPSNASESQKAFYQNQDPGTYTQLVLETAVIEILSLPVPASQIVSSLVQIIVHVQS
TLIQSNGLQGTPSGAGQGSVLPTSPSGGSTDSLNTSRSTPSTSGINAVNFVSKSGYTCQQ
LSCLMIQACGLLLAQLPPDFHIQLYLEASRVIKECWWLTDGKRSLRELDSAVGYALMDPT
WAAQDTTSTAIGNVVSLLHSFFSNLPQEWLEGTHAIIKHLRPLTSVAMLRIAFRIMGPLL
PRIAFTRPLFMKTLALLLNSISDVYGKSSQPSSPTEASEIADLIDFLHHIVLYEGQGGPV
QSSSKPKSEILTLCSKLMESLRPDVQHLLSHLKTDPNSSIYAATHPKLVQNPS
NT seq
4842 nt
NT seq
+upstream
nt +downstream
nt
atggatcaaaaccagaggacgaaccgagcttatcagtttcatcccgcgagagctgccatt
atcgacctcttcaatctctacttagggagaaatccccgtcaaaaattagatgatgctgtt
cgagaacccccgaacaaaacacaaaaaagggtaactgctctcaacagagagcttcctcct
cgaaatgaacaatttctttttgattttgagcgacttcaaagccagtttccggaccaggag
caactgcgtgcaatgacggaatctgttctgatttctttggttgtgcaatgttgcagtcat
gcaccaagagcagaatttattctgtttgctattcggagcttgtgcaacataggttatgta
aactgggattcattcttgcctaatctcctttcttcaatttccactgctgaggcatcatat
ggacagggtaatcaagcagttggtgctgtgtcatcaagcaatttatctcaatctggtatc
ggtccatcttctagtacagttactaatcctactaattttcaaccttcaaatcctacctct
cctttgccttcaattcatggtatgggatctcctggccagtctgcaacagaaccagcatca
tgtgccactctgtcaccagttaaatcttctgatgtttcctgcactggacagcacatatcc
agggccaatccatcactcacagataattctattagctgtctacgtcagctgtcctgcaca
attattttagctgggatcgagtccaatcttaagccagttacttatgctgacattttctcc
cacatgctgaactggctagtaaattgggaccaaaggcaacaggggcttgatgaatgtgat
ggttcaaaggcctggaaacctgatagggctcttaatgaatggctgcacagttgcttggat
gtaatttggctgttggttgaggaggataaatgtcgtgtgcccttttatgaactacttcgt
agtggttttcagttcgttgaaaatatacctgatgacgaagccttattcacacttatattg
gagacccataggaggcgagatatggtggctatgcacatgcaaatgttagatcagcacctc
cactgccccacatttggaacccatcggtttattactcaggcgtatcaaaatatctctgga
gaacaagttgcaaacgtgcgatatgtaccaatcacatatcctagcgtccttggtgaacca
ttacatggagaggatcttgccaattccatccaaagagggagtttggactgggaaagagct
atgcgttgtctgagacatgctcttcatactactccatctccggactggtggaggcgtgtg
gttcttttggctccttgttataggcaacctggacaacaagtttcaactcctggctcagtt
ttctcttctgaaatgatttgtgaggcaacaattgatagaataatggaactattgaagtta
acaaattcagatacacattgttggcaagattggctcatattttcagatgtgtttttcttc
ctcatgaagaatgggtgtattgattttactgattttgtggacaaacttgcatcacgaatt
actaagggtgagaaccaaattcttcgaagcaatcacgtgacatggctactagctcaaata
attcgaattgagattgtgacaaatgctttaagtacagaccccaggaaggagattgtgaca
aatgcttcaagtacagaccccaggaaggtggagactactcgaaagatgctatcctttcac
agagaagatagaaactctgatccaagtactggtggtcctcaaagtatcctgcttgacttt
ataagcagtagccaaacattgcgtatttggtcattcaatacttctattagagaattttta
agtcatgaacaacttcagaaaggaaagcaaatagatgagtggtggaagcaagtcactaaa
ggagagcgtatgctggattttatgaatatggatgatagatcaattgggatgttttgggtt
ctttcacataccatggcccagcctgcttgtgatgctctggtaagctggttggttgctcct
ggagtccaagaactgttgccaggatctaatgtgcaaggtggtgagagggtgatgatgatg
cgggaaacgaacccattgccaatttctttgttatctggcctttctatcaacttatgtttg
aaactggcatatcaaattgaagattccttatttggtggtcaggtcatccctagccttgca
atggttgaaacatattctcggttgctgctgattgcaccccactctatatttcgtccacat
ttcactgcattgacacagaggaatccatccatattcaataaacctggtgtatccctgctc
ttgcttgaaattttgaactaccgtttacttccactttacaggtaccatggaaaaagcaag
accctgatgtatgatgtcataaaaataatttctatgctaaagagcaaacgtggagaccat
cgcgtattcagattggctgaaaatctatgcatgaatctcatcttgtcgctgagagatttt
ttcctggtgaaaaaagaattgaagggccccactgaattcactgaaaccttgaataggata
acaatgataaatcttgccatcactatcaaaacccgtggaattgctgaggttgaacacatg
cttttccttgcacctcttttggaacaaataacagcaacaagtcaacatatgtggtcagaa
aagactctacgttatttccccccagttatccgtgaagccttaatggggcgggtggacaaa
agggcccaggcaattcaggcgtggcagcaggcagagacgacagttataaatcaatgcaca
cagcttctgtctccatcagctgatccttcatatgttatgacctacattagtcatagtttt
cctcaacatcggcagtatctatgtgctggcgcttggatgcttatgcatgggcaccttgaa
aacattaatagtgcaaatcttgcacgtgtcctgagggaattttcccctgaagaagtaaca
tccaatatatacatactggtggatgttcttcttcaccatatccatgtagaactgcagcgt
ggacatctcttacaggaccttctattaaaggctagcgcgaatctttccttttttatttgg
acccatgagattcttcctttggatattttgcttctagcacttattgaccgtgatgatgat
ccccatgctttgcggattgtgataagtctactggacagacaagagcttcaacagagagtc
aaattgtttctgaatcgtgggtccccagagcattggcttaactctggaatttttaagcgt
gttgagttgcagaaagctctggggaatcatctgtcttggaaggatcggtatccccccttc
tttgatgatattgcagcacgtttacttccagtcatcccattaattgtatatagactaatt
gaaaatgatgccacagatatagctgagaaagtcctagttgtgtattcctcatttcttgct
taccacccactgagatttacgtttgttcgtgatattcttgcatacttctatggtcatctt
cctagcaagcttattttaagaatattgaatgtacttgatctgtccaagatcccactgtcc
gagtcgtttcctcagcacattgcttcatcaaatcctgctacctgcccgcctccagattat
tttgcaactctcttattaggcctcgtgaataatgtcattcctcctctacatagcaagtca
aaatgtatgggggacatttcaaataactctgttcggggaccacataacaagactccagca
tcgtctcagtctgtgccatcaaatgcatcagaaagccagaaagcattctatcaaaaccag
gatcctggaacttatacccagcttgttcttgaaacagcagtaattgaaatcctctcactt
ccagtgcctgcttctcagatagtatcatcacttgttcaaataatagtgcatgttcagtca
acactaattcagtccaatggtctgcaaggaactccaagtggtgctgggcaaggttctgtc
ctaccaacttctccttcaggtggaagcacagactccttgaacaccagcagatcaactcca
tccacatctggaataaatgctgtcaactttgtctccaaaagtggttatacgtgccaacaa
ttatcttgcttgatgatccaagcttgtggtcttctattggctcagctccctccagatttt
catatacaactttatttagaggcgtcacgtgtaattaaagagtgttggtggctcactgat
ggtaaaagatcgctgagggaactagactctgctgtcggctacgctttaatggatccaaca
tgggctgctcaagataccacctcaacagccataggtaacgtagtttcgctgctccactct
ttcttcagcaatcttccacaggagtggctggaagggacacatgcaatcattaagcatctt
aggccactgacatctgttgcaatgttgagaatagcattccgtattatgggtccactgctc
ccaaggattgcctttactcgacctcttttcatgaagactttagccttattacttaattca
ataagtgatgtgtatgggaagagctcacaaccatctagtcctaccgaggcatcagaaata
gcagatctcattgacttccttcatcacattgtcctgtatgaagggcagggaggacctgta
cagagtagtagcaagcctaagtcagaaatattgactctttgctcaaaattaatggagtcc
ttgcggccagatgttcagcatcttctttcccacttgaagaccgatccgaactcctccatt
tatgctgcaacccatccaaagctggttcaaaatccttcataa
DBGET
integrated database retrieval system
