Telopea speciosissima (New South Wales waratah): 122645775
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Entry
122645775 CDS
T07910
Name
(RefSeq) TATA-binding protein-associated factor BTAF1-like isoform X1
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
tss
Telopea speciosissima (New South Wales waratah)
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tss03021
]
122645775
Transcription machinery [BR:
tss03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
122645775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3535
SNF2-rel_dom
Helicase_C
HEAT
HEAT_ECM29
HEAT_EF3_N
TOR1L1_N
HEAT_2
TPR_Trm732_C
HEAT_EZ
UTP20
IFRD
Motif
Other DBs
NCBI-GeneID:
122645775
NCBI-ProteinID:
XP_043695072
LinkDB
All DBs
Position
11:4349803..4441586
Genome browser
AA seq
2069 aa
AA seq
DB search
MAQQSSRLHRLLTLLDTGSTQATRFAAARQIGDIARAHPQDLNSLLRKVSQCLRSKNWDT
RVAAAHAIGAIAENVKHATMTDLFECVETEMSDMGISAVVDDLIMAWPNFHPKFVAGASF
RSFEISKVLEFGALLASGGQEYDIGGDSNKNPGERIARQKHNLRRRLGLDMCEQFMDVND
MIKDEDLLVEKYNFHGNGMDRRYYTSQSGNRIQQLVANMVPSVISKRPSARELNLLKRKA
KINAKDQTKGWTEDGDFEVSYSQNPGTPKGSSADPLSSSKAFMDAPLDEDGFENDGDGRW
PFHNFVEQLILDMFDPSWEVRHGSIMALREILTHQGSSAGVYLPDLCSKNVWPVDFEDKI
DLSNTKREREIDLSKTKREQEIDLNIQVGLEESEPSLKRQKTEHVLCETISIMSSVNKDI
DLDACVKVEDGVWRSIPGHINGGFDIGLVKMEQEACVDELQYQHNESGGVAENSSVEDNS
SIKTLNILKDLPENCKLMKLVKLTRHSWIKNLGFLQDCAIRFLCVLSLDRFGDYVSDQVV
APVRETCAQALGAALKYMHPSLVHETLNILLQMQCRPEWEIRHGSLLGIKYLVAVRRELL
HDLLGCVLHACKAGLEDPDDDVRAVAAEALIPAATAIVSLNGEILHSIVMLLWDILLDLD
DLSPSTSSVMNLLAEIYSQEEMIPKMFGTVKEKEEFDLNELVQIDEHGAGLKSEENPYIL
STLAPRLWPFMRHSITSVRHSAIRTLERLLEAGWRRSSSESKPSCIWPSFILGDTLRIVF
QNLLLESNEQILQCSERVWSLLLQCPEQDLETAARSYFSSWIELATTPYGSPLDAIKMFW
PVTLPRKSHFKAAAKMRAAKLDNDCSINFGFDSAKGASSLEKNGDVFTNFVKIIVGADGQ
KSVTHTRVVTASALGILASKLPEESLQFVIDPLWSNLTSLSGVQRQVASMLLVAWFKEIR
TKGLVGIHGVMSGFIDQIRQWMLDLLSCTDPSLPTKDSTLPYAELSRTYTKMRNEASLLL
RVIESSTLLKNMLMATKINPDTLSVDDAINFSSKLLVPSNQAAGEETIERHFLDDLESSK
QRLLTTSGYLRCVQNNLHVTVSAIVAAAVVWMSELPVRLNPIILPLMASIKKEQEEILQQ
KAAEALAELIYHCTTRKPGPNDKLIKNLCSLTCMDPCETPQAAIINSMDIIDDQDLLSFG
RGTVQQKTKVHLLAGGEDRSKVEGFISRRGSELALKYLCARFGGSLFDKLPKLWDCLTEV
LKPWNLQGLVPTDDQHMMQAVDSVKDPQILINNIQVVRSIASMLDDSLKPKLLSLLQCIF
TCVRHYHVAVRLAAARCITSMAKSMTVSVMGVVVEKTIPMLGDTTSVHARQGAGVLVSLL
VQGLGVELVPYAPLLVVPLLRCMSDCDHAVRQSVTHSFAALVPLLPLARGVPPPVGLSEG
LSKNAEDAQFLEQLLDNSNIDDYNLSTELKVTLRRYQQEGINWLAFLRRFKLHGILCDDM
GLGKTLQASAIIASDIAEHRASKNGKDPLSLIICPSTLVGHWAYEIEKFIDPSVMTPLQY
VGSAQERISLRCQFEKHNVVITSYDVVRKDIDYLRQQLWNYCILDEGHIIKNAKSKITTA
VKQLKAEHRLLLSGTPIQNNILELWSLFDFLMPGFLGTERQFQATYGKPLVAARDPKCSA
KDAEAGALAMEALHKQVMPFLLRRTKDEVLSDLPEKIIQDRFCDLSPVQLRLYEQFSGSD
ARKEISTLVHVNDSEDTRGHSPSPKASSHVFQALQYLLKLCSHPLLVLSEKLPDYLSCIL
SNIMPGIDDIISNLHELHHSPKLVALQEILEECGIGSDASSSEGAIGVVQHRVLIFAQHK
ALLDIIEKDLFQAHMKSVTYLRLDGSVEPEKRFEIVKSFNSDPTIDVLLLTTHVGGLGLN
LTSADTLVFMEHDWNPMRDHQAMDRAHRLGQRKVVNVHRLIMRGTLEEKVMSLQKFKVSV
ANAVINAENTSLKTMNTDQLLDLFTSAQTSRKGATVSKSSEGSFDGDPKSVGGGKGLKAI
LGGLEELWDQSQYTEEYNLNQFLAKLNGA
NT seq
6210 nt
NT seq
+upstream
nt +downstream
nt
atggctcaacagtcgtctcgtcttcatcgtttgctcactctattggacactggttcaacc
caagcaacaagatttgcagctgcgcgtcagattggggatattgcaagggcacatcctcaa
gacttgaactctctgctaaggaaggtatctcagtgtcttcgtagcaagaattgggatacc
agggttgctgctgctcatgctattggggctattgcagagaatgtgaaacatgcaactatg
acagatctatttgaatgtgttgaaacggagatgtcggacatgggaatttccgctgttgtt
gacgatctaattatggcgtggccaaactttcaccctaaatttgtggcaggggcctctttc
agaagttttgaaatcagcaaggtgttggaatttggtgctttgttagcatctggtggtcag
gaatatgatattgggggtgacagtaacaagaaccctggggagcgtatagcccgtcaaaaa
cacaatctccgacgccgtttgggtttggacatgtgtgagcagttcatggatgtcaatgat
atgatcaaagatgaagatcttcttgtggaaaagtataacttccatggaaatgggatggac
aggagatactatacatcacaatctggaaatcgtattcagcaactagtggcaaatatggtt
ccaagtgtcatttctaaaagaccaagtgcaagggaattgaatctcttgaaacgaaaagca
aaaataaatgcaaaggatcaaacaaaaggatggacggaggatggggattttgaggtgtca
tattctcaaaatccagggacaccgaagggctcatctgcagatccactgagttctagtaag
gcatttatggatgctcctctagatgaagatggctttgagaatgatggagatgggcggtgg
cctttccataattttgttgaacaacttatccttgatatgtttgatcccagttgggaggtg
cgccatggaagtatcatggctctaagagaaattttaacacatcaaggttcttctgctgga
gtatatttgcctgacttgtgctcaaaaaatgtgtggccagttgattttgaagataaaata
gatttaagcaatacaaagagagaacgggaaattgatttgagtaaaacaaagagagagcag
gaaattgatttgaatatacaagtgggattggaggagtctgagccaagcctaaaaagacaa
aagactgaacatgtattatgtgagacaatcagcataatgtcctctgtgaacaaggatatt
gaccttgatgcttgtgtaaaggttgaagatggtgtgtggagatccatccctgggcatata
aatggtggatttgacatcggtcttgttaagatggagcaggaggcttgtgttgatgagctt
caatatcagcacaatgaaagtggtggtgtggcagagaatagttctgttgaggataatagt
tccattaaaacattgaacatacttaaagatctccctgaaaattgcaaattgatgaaactt
gtcaaactgacaagacattcgtggattaaaaatctgggattccttcaagattgtgccatt
cgtttcttgtgtgtattgtcattagaccgttttggtgattatgtttctgaccaggttgtt
gcaccagtgcgtgaaacgtgtgcacaagcacttggtgctgcgctcaagtacatgcatcct
tcattagtccatgagacactgaacatcttgctgcaaatgcagtgtagaccagaatgggaa
atacgtcatggaagccttttaggtatcaagtatctggttgccgtgcgacgggaattgctt
cacgatttgcttggatgtgttctccatgcctgtaaagcagggctggaggatccagatgat
gatgttagggcagttgctgctgaagctctgatacctgctgcaactgctatagtttctcta
aatggcgaaatattgcattccattgttatgttgctttgggatatcttgcttgatctggat
gacctaagtccatccactagcagtgtcatgaacttattggcagaaatctattcccaggaa
gaaatgattcctaagatgtttggtacagtgaaagaaaaagaagagtttgatcttaatgaa
ttagttcagattgatgagcatggggcaggactcaagtctgaggagaatccttatatttta
tctactctggcaccaagattgtggccatttatgaggcatagtattacatcagttcgtcat
tcagccatacgtactttggagcgtctgcttgaagcgggatggagaaggagctcttccgag
tcaaaacctagttgtatttggccttcttttattttgggtgatactcttaggattgttttt
cagaatcttctccttgaatcaaatgaacaaattctgcaatgttcagagagggtttggagt
ctcctactacagtgtccagagcaggatttggaaactgctgcaagatcatatttctcttcc
tggatagaacttgctacaactccatatggttcacccttggatgctataaaaatgttttgg
ccagtaacccttcctcgtaaaagtcattttaaagctgccgctaagatgagggcggcaaag
ctagacaatgattgcagtataaactttggctttgattctgcaaaaggggcttcttcacta
gaaaaaaatggagatgtgtttacaaactttgttaagataattgtcggtgcagatggtcag
aagtctgtcactcatacacgagtagttactgcttcagctttgggtattctagcttctaag
ttacctgaagagtctttacagtttgtcattgatccattatggagcaaccttacctccttg
tctggggtccagagacaggtggcttccatgcttctcgttgcttggttcaaagagattagg
actaagggtttagttggaatccatggggttatgtctgggttcattgatcaaattagacaa
tggatgttggatttgttgtcatgcaccgatccttcattacctacaaaagattcaacactt
ccttatgctgagctttcaagaacttacaccaagatgcgtaacgaggccagcctgttgctt
cgtgttattgaatcatctacactgcttaagaatatgttgatggcgactaaaattaaccct
gatacattaagtgttgatgatgcaatcaatttttcatctaaacttttggtgccaagtaac
caagcagctggggaggaaactatagagagacacttccttgatgatttggagtcatcaaag
caacggcttttgacaacttcaggctatttaagatgtgttcagaataacttgcatgtcact
gtatcagccatagttgctgctgcggtcgtctggatgtctgagctgcctgtcagacttaat
ccaattattttgcctttgatggcttctataaaaaaagagcaggaggaaatactgcaacag
aaggcagctgaagcacttgctgagcttatttatcattgtaccacacgcaaaccaggtcca
aatgataagttaattaagaacctttgcagcttgacgtgcatggatccttgtgagacaccc
caagctgcaatcataaattccatggatattattgatgatcaagatctgctatcttttgga
agaggtacagttcaacagaagacgaaggtacatttgctagctggaggggaagaccgatca
aaggttgaaggcttcataagccggcgtggctcagaacttgcattgaagtacttgtgtgca
aggtttggtggttcgctatttgataagcttcctaaattatgggattgccttactgaagtc
ctcaagccttggaatcttcaagggctagtgcctacagatgatcagcatatgatgcaagca
gtcgattctgtcaaggatcctcagatcttgataaacaatatccaggtggtacgttcaatt
gcatctatgctggatgattcattaaagccaaaattgctctctcttctacaatgtatcttt
acatgtgtgcgtcattaccatgttgctgtacgattagctgctgcaaggtgtattacctca
atggcaaagtcgatgacagtaagtgtgatgggggttgtggttgagaaaacaatccctatg
ttgggggatacaacatctgttcacgccaggcaaggagctggcgtgcttgttagtttgctt
gttcaagggttgggagtagaactagtcccatatgctcctttgttagtagtgcctcttctg
aggtgtatgagtgactgtgaccatgctgtcaggcagagtgtaacacatagttttgctgcc
cttgtacctcttcttccattagcaaggggcgttccaccaccagttggattaagtgaaggt
ttatctaaaaatgcggaagatgcacagttccttgagcaactacttgacaactccaatatt
gatgattacaatctttccactgaattgaaagtgacactgcgaaggtatcagcaagagggt
ataaactggttggctttcttgagacggttcaagctccatgggattttatgtgatgatatg
ggactcgggaaaacactgcaggcatcagcaatcatcgcatctgatatagcagagcaccgt
gcatccaagaatgggaaggatcctctgtctctaattatttgcccatctacactagttgga
cattgggcctatgaaatagagaaatttattgatccttctgtaatgactcctctacagtat
gttggttctgctcaagagcgtatttcacttagatgtcagtttgaaaagcataatgtcgtc
ataacatcctatgatgtagtccgcaaggatattgactaccttagacagcaactctggaat
tactgtattttagatgagggacatattattaagaacgcaaagtctaaaattacgactgcg
gtaaagcagcttaaagctgaacaccgtcttctattgagtggaacaccaatccagaataac
atcttggagttatggtcactttttgactttctaatgcctgggtttcttggaacagagaga
caattccaagccacttatgggaagccattggtagcagctagggatcccaaatgttctgcc
aaggatgctgaagcaggggcacttgcaatggaagcattacataagcaggtcatgcccttc
ctcctccgtcgaacaaaggatgaggttttgtctgatttgcctgagaaaattattcaggac
agattctgtgatctcagccctgtccagttaagactttatgaacagttttctggttcagat
gcaagaaaagaaatttccaccttggttcacgtgaatgactcagaagatactagaggacat
agcccttcaccaaaagcatcttcacatgtcttccaggcacttcaatacctactgaagctt
tgtagtcatccattgcttgtccttagtgaaaagcttccagattatctctcgtgcatttta
tccaatatcatgcctggcattgatgacatcatttcaaaccttcatgaactgcaccactct
ccaaaattggttgctctccaagaaattctggaagaatgtggaataggctcggatgcttca
agttctgaaggtgccattggtgtggtgcagcacagggttttgatatttgctcagcacaag
gccttactggacataattgaaaaagatttgtttcaagcacatatgaagagtgtcacatac
ttgaggctggatggctctgttgaaccagaaaaacgttttgaaatcgtgaaatccttcaat
tcagaccctaccattgatgtactactactcacaacacatgttggtggacttggattgaac
ttgacatcagctgacacactcgtttttatggagcatgattggaatccgatgagagatcac
caggctatggacagagctcataggttgggtcaacgcaaggttgtgaatgtccatcgtctt
atcatgcgtggaactctggaagagaaagttatgagcctccaaaagttcaaagtttcagtt
gctaatgcagttattaatgcagagaacaccagcctgaagacaatgaatacagaccagttg
cttgatctattcacatcagcccagactagcagaaagggtgctactgtttcaaagagctca
gaaggtagctttgatggagacccaaaatcagttggtggtgggaaggggttgaaagctata
cttggtggactagaggagctttgggatcaatcacagtatacagaggaatacaatctcaac
cagtttctagcaaagcttaatggagcttaa
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integrated database retrieval system
