Telopea speciosissima (New South Wales waratah): 122645785
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Entry
122645785 CDS
T07910
Name
(RefSeq) RNA-binding KH domain-containing protein RCF3-like
KO
K21444
poly(rC)-binding protein 3/4
Organism
tss
Telopea speciosissima (New South Wales waratah)
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tss03019
]
122645785
Messenger RNA biogenesis [BR:
tss03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
122645785
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH_KhpA-B
KH-I_KHDC4-BBP
KH_5
Rv2632c-like
Motif
Other DBs
NCBI-GeneID:
122645785
NCBI-ProteinID:
XP_043695085
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All DBs
Position
11:39574191..39605279
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AA seq
631 aa
AA seq
DB search
MDKNKPGSFKKRFQFKKKKSNKKGPRPNFSHELNAGPPSASDTVYRILCPSSKIGSVIGK
GGSIINALRDETRAKIRVAESVPGSDERVIIISSSATRKPRRYNPNEDDEDDDFTENEHE
PMQPHCPAQDALLKVHERIAEEDDLFGGITCEDNNETNVVTARLLVPNNQVGCLLGKGGN
IIQKLRTETNANIRILPTEHLPACAMSTDELVQISGPSAVGKRALYEVSTLLHQNPRKDN
QPLNYPMPSGGPGFYPPGPPIGNMLPQRNPMWSHQNPGTHGTSRMPWMGGYGSGFDGVPP
VNAGDASDEFSMKILCPAGKIGGVIGKGGSTVRQFQQETGASIQVDDTIPEAEERSIVVS
CFEALWNPISPTIEAILQLQSKASELSEKGMITTRLLVPSNKVGCLLGQGGHVITEMRRR
TQADIRVISKDGKPKCASADEELVQISGNFAVAREALSEIASRLRVRTLRGSNASLEPPP
VPPPFQGFGPPRPLGPPGNFPGRALPPAGITGVGGSGGYEHVQAPGHEYEGQSYHVQPSA
TGYPNVSSSMEVKVPNSAVGSFHGISGSGVSNFREVSGARVKLQDPQSGGSECVVEIHGS
NEQMNATQNFLQAYMGSAVHNYNSQQHASYQ
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atggataagaacaagccaggttctttcaagaaacgattccaatttaagaaaaaaaagagt
aacaaaaaaggtccaaggccaaattttagtcatgaactgaatgctggacctcctagtgct
tctgacacagtctatcgtattctctgtccaagtagcaagattggtagtgttattggaaaa
ggtggtagcataatcaatgccttgagagatgagacccgtgccaagatcagagtcgctgaa
tctgttcctggctcagatgaaagagtaatcattatctctagttctgctacaagaaagcct
aggagatacaatcccaatgaagatgatgaggatgatgatttcactgagaatgaacatgag
cccatgcagccacattgtcctgcccaggatgctctgttaaaagttcatgaacgaattgct
gaggaagatgatctctttggtggcataacatgtgaagataataatgaaaccaatgtagtc
actgcacgccttcttgttccaaacaatcaagtggggtgtcttctaggcaaaggtggaaac
atcatccagaaattgcggactgaaactaatgcaaacattcgtatcctgcccacagagcac
ctgcctgcttgcgcaatgagcactgatgagttagtgcagatatccggaccatcagctgtg
ggaaagagggctctctatgaagtttctactctattgcaccagaatccacgtaaagataat
caaccactgaattatcctatgccgtctgggggccctggtttttatcctcctggccctcct
attgggaatatgttgccacaaagaaatccaatgtggtcgcaccagaaccctggtacccac
ggtacatctcgaatgccatggatggggggatatggaagtggtttcgatggtgttccacct
gtaaatgctggggacgcatcggatgagttctctatgaaaattttgtgtccagctggaaaa
attggtggggtaattggaaagggaggttctactgttagacagttccaacaagaaacggga
gctagcattcaagttgatgatacgatacctgaagcggaggaacgttcaattgttgtctct
tgttttgaagctctctggaacccaatatcaccaactatcgaggccatccttcagcttcaa
agcaaagcaagtgaactgtctgagaaaggcatgatcacaacaaggcttcttgttccatca
aataaggttggttgtctcctaggacagggaggtcatgtaattactgaaatgagaagacga
acgcaagcagacatacgtgttatatccaaggatgggaagcctaagtgtgcttctgcagat
gaagagcttgtgcagatatccggaaattttgctgttgctagagaagccctgtcagagatt
gcatcaagacttagagtgagaactctccgaggttcaaatgcttcactcgaacctcctcct
gtgccaccaccttttcaaggatttggtcctccacgtcctcttggtcctccaggaaacttc
cctggaagagcactaccaccagctggcattactggagttggtggctctggtggatatgaa
cacgtacaggctccgggacatgaatatgaaggtcagagttatcatgttcagccatctgct
actggatacccaaatgttagcagttctatggaggttaaggttccgaacagtgcagtagga
tcttttcatggaataagtggaagtggtgtctccaatttccgtgaagtttctggagcaaga
gtgaaactgcaagatcctcagtctgggggttcagaatgtgttgttgagatccatgggtct
aatgagcaaatgaatgcaactcagaattttcttcaggcctacatgggttcggcagtacat
aactacaactcgcagcagcatgcttcttatcaatag
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