Telopea speciosissima (New South Wales waratah): 122645800
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Entry
122645800 CDS
T07910
Name
(RefSeq) THO complex subunit 4D-like isoform X1
KO
K12881
THO complex subunit 4
Organism
tss
Telopea speciosissima (New South Wales waratah)
Pathway
tss03013
Nucleocytoplasmic transport
tss03015
mRNA surveillance pathway
tss03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122645800
09122 Translation
03013 Nucleocytoplasmic transport
122645800
03015 mRNA surveillance pathway
122645800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tss03019
]
122645800
03041 Spliceosome [BR:
tss03041
]
122645800
Messenger RNA biogenesis [BR:
tss03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
122645800
TREX complex
122645800
Spliceosome [BR:
tss03041
]
Complex C
Other components
EJC/TREX
122645800
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
122645800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
Motif
Other DBs
NCBI-GeneID:
122645800
NCBI-ProteinID:
XP_043695098
LinkDB
All DBs
Position
11:51149354..51157552
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AA seq
276 aa
AA seq
DB search
MATSLDMSLDDLIKSRSSSERGRGRGRGRARRGRGPGGNFGRGRTGGNRGGALRVNTRPS
SYTIAKSFSRTKDFTWQHDLFQDSLMAAGISGIESGTKLYVSNLDYGVSNEDIKELFSEI
GELKRYAIHYDRNGRSTGTAEVVYVRRSDALAAVMRYNSVVLDGKPMKIEIIGTNLELPV
SARVNVIGAANGRGRRTVFMTPEVGLGGGSAPVNRGSGRWGRGVSWRGRGGSRGRGRGRG
GRGRGRGRGRKQPVEKSADELDKELENYHTESMQTS
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atggcaacgtctttggatatgtcgcttgatgatctgataaagagcagaagtagtagcgag
agggggagaggccgaggccgaggtcgggcccgccgagggcgaggcccaggtgggaatttt
ggccgtggaagaacgggagggaaccgtggaggggctttaagggtgaatacacggccatca
tcttacacaattgctaagtctttcagcagaaccaaggattttacatggcaacatgatttg
tttcaagatagcctgatggctgcagggatatctgggattgaatctggaacaaagttatat
gtctcaaacttggactacggtgttagcaatgaagatataaaggaacttttctctgagatt
ggagagcttaagcggtatgcaatccattacgacaggaatgggcggtcaactggtacagct
gaagtggtgtatgttagaagaagtgatgcattagcggctgttatgagatataatagcgtt
gtacttgatgggaagccgatgaagattgaaattattggcaccaatttggaattgcctgtt
tcagctagggtgaatgttattggagcagcaaatggaagaggaaggagaacggtttttatg
acgcctgaagttggtctaggtggaggatctgctccagtcaatcgtggttctggtaggtgg
ggtcgtggagtttcttggcgtggccgtggtggtagccgtggtcgtggacgtggtcgtggt
ggccgcggtcgaggacgtggccgtgggaggaaacaacctgttgagaagtcagctgatgaa
ttggataaagaattggagaactatcatactgaatcaatgcaaacatcgtag
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