Telopea speciosissima (New South Wales waratah): 122645811
Help
Entry
122645811 CDS
T07910
Name
(RefSeq) pleiotropic drug resistance protein 1-like
KO
K08711
ATP-binding cassette, subfamily G (WHITE), member 2, PDR
Organism
tss
Telopea speciosissima (New South Wales waratah)
Pathway
tss02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
122645811
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tss02000
]
122645811
Transporters [BR:
tss02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG2, 3 subgroups
122645811
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
PDR_assoc
ABC2_membrane_7
AAA_21
AAA_29
AAA_25
AAA_16
AAA
AAA_28
ABC_trans_N
RsgA_GTPase
TIP49
Motif
Other DBs
NCBI-GeneID:
122645811
NCBI-ProteinID:
XP_043695113
LinkDB
All DBs
Position
11:12715582..12732672
Genome browser
AA seq
1448 aa
AA seq
DB search
MDTADLYRISSLRNSRRAGGSFRNDSSSIWRNNGLDIFSRSSSRDDGVDDEEALKWAAIE
RLPTYNRIRKGIFSMEEGVTREVDIDTLTFTERKMLLDRVLRAAEEDNEKLLLKLKDRLV
TVGIEIPTIEVRFEHVNVDAEAYVGSRALPSMINFSTNIIEGFLSNLGILRSKKRPLTIL
HDVSGIVKPGRMTLLLGPPCSGKTTLLLALAGKLDKDLKFSGRITYNGHEMHEFVPQRTS
AYISQRDLHIGEMTVRETLAFSARCQGVGTRYDMLTELSRREKDAKIKPDPDVDLLLKAA
SIEGQEISVVTDYILKTLGLEICADTMVGDQMLRGISGGQRKRVTTGEMLVGPARALFMD
EISTGLDSSTTFQIVNSLKQFIHILNGTAFISLLQPAPETYELFDEIILLSDGQIVYQGP
RESVLEFFESLGFKCPERKGVADFLQEVTSRKDQQQYWTRKDEPYRFITVDEFVEAFRSF
HVGQKLADELAIPFDKSMSHPAALSTNKYGVSNKELLKACISRELLLMKRNSFVYIFKLI
QLTIVAFISMTVFLRTEMHKNTVIDGGIFVGALFYALNNIMFNGFSELAMTVMKLPVFYK
QRDLLLYPPWAYSLPTWILKIPITLVEVAIWTFTTYYVIGFDPNVGRLFKQYLLLICVNQ
MASGFFRLIASIGRNMVVSMTFGAFALLVLLVLSGFILSRDNIKKWWIWGYWISPLMYGQ
NALVVNEFLGKSWAQILPNGETLGVAVLKSRAVFTEAYWYWIGVGALIGYVFLFNGLFTV
ALTYLNPSGKPQAIITEESLNDKNASRNGEMIELSPRGKSSMGGTSAESSSSNHQNRKRG
MVLPFEPLSFTFDEIRYSVDMPQEMKARGVTEDRLELLRGVSGAFRPGVLTSLMGVSGAG
KTTLMDVLAGRKTGGYIEGSIKVSGYPKKQETFARISGYCEQNDIHSPHVTVYESLVYSA
WLRLAPEINSSTRKMFIEEVMDLVELDSLREALIGLPGVNGLSTEQRKRITIAVELVANP
SIIFMDEPTSGLDARAAAIVMRTVRNIVDTGRTVVCTIHQPSIDIFDAFDELFLLKQGGE
EIYVGPMGKHACHLIKYFEGIKGVSKITDGYNPATWMLEVTTTAQEAALGVNFAEIYKNS
ELYRRNKEMIDELSKPTTGSKDLYFSTQYSQSFFIQCIACLWKQHWSYWRNPPYTFVRMF
FTTFIALMLGSMFWGLGSKTQREQDLFNAMGSMYSAVIFLGIQNGGSVQPIVDIERTVFY
RERAAGMYSALAYAFAQVTIEIPHIFVQTLIYGVIVYSMIGFQWTVAKFFWYIFFMYFTL
LYFTFYGMMTVGITPNQHIASIVSSAFYAIWNLFSGFIIPRPRIPIWWRWYYWACPVAWT
LYGLVVSQFGDIQDTLESGELTVQEFLSSYFGFRHDFLGVVAIVVVGFNVLFAFVFAFAI
KAFNFQRR
NT seq
4347 nt
NT seq
+upstream
nt +downstream
nt
atggacactgctgatctttacagaataagtagcttgcgcaatagtcgccgtgctggtggc
agttttcgtaatgatagttcttcaatatggaggaataacgggttggatattttctcaaga
tcttcatctcgagatgatggtgttgatgatgaagaagctctgaaatgggcagctatagag
agacttcccacttacaatcgtataaggaaaggtatattttctatggaagagggtgtgacg
agggaagttgacattgatactcttaccttcacagagaggaagatgttattagatagagtg
ctcagagcagcagaggaggacaatgagaagctcttgctgaagctgaaggaccgccttgtt
acagttggaattgaaattcccaccatcgaagtccgctttgagcatgtaaatgtagatgct
gaagcttatgtgggaagtagagccttacctagtatgattaacttctcaacaaacataata
gaggggttcttgagtaatcttggaatccttcgaagtaaaaagaggccacttacaatactc
catgatgtcagtggaatagtcaagcctggcagaatgacattgcttttaggccctccatgc
tccggaaagaccacgttgctgttggctttggcgggaaagcttgataaagatctaaaattc
tctgggagaatcacttacaatggccatgaaatgcatgagtttgtcccacaaaggacatca
gcttatatcagtcaacgagatctccacattggggagatgacagtgagagaaaccttagct
ttttctgctagatgtcaaggagtgggaactcgctatgatatgttgacagagctgtcgaga
agagaaaaagatgcaaaaattaagccagatccggatgtcgatcttctcctaaaggcagca
tcaatagaaggacaggagatcagtgtagtaactgattacattctcaagaccttgggactt
gagatttgtgccgataccatggttggagatcaaatgctgagaggtatttccggaggacaa
agaaagcgtgtcacaacaggggagatgctggttggaccagcaagagcacttttcatggat
gagatatcaactggtttggatagttcgacaaccttccaaattgtgaattcacttaagcaa
ttcatccacattctcaatgggactgctttcatatctctcctccagccagcaccagaaact
tatgaactctttgatgagattattctcctatcggatgggcagattgtgtaccagggaccc
cgtgaatctgtgctcgagtttttcgaatctctcggtttcaaatgtcctgaaaggaagggt
gtagctgacttcttgcaagaggtgacatcaaggaaagatcaacaacaatactggacacgc
aaagatgaaccttacagatttatcactgtcgatgaatttgtcgaggcattccgctcattc
catgttggtcagaagctagcagatgaacttgccatcccatttgataagagtatgagtcac
cctgctgccttaagtaccaacaaatatggtgttagcaataaggaactattgaaagcctgc
atatcaagggaattactgcttatgaaaagaaactcttttgtctacattttcaagttgata
cagcttacaattgtggcattcatatcaatgacagtcttcctgcgtactgagatgcacaaa
aatacagtaattgatggtgggatttttgttggtgctttgttctatgctctcaacaatatt
atgttcaatggtttctcagagcttgccatgactgtcatgaagcttcctgtattttacaag
caaagagacctccttttgtatcctccatgggcatattcactgcccacatggatcctaaag
attcccattacactagttgaagttgctatttggacgttcacaacatactatgtcataggc
tttgacccaaatgttggaaggcttttcaaacagtaccttctactcatatgtgttaaccaa
atggcatctggattttttcgattgattgcttcaatagggaggaacatggttgtttcgatg
acattcggggcctttgcattacttgtactcttggttctgagtggatttatcttgtcacga
gacaacataaaaaagtggtggatatggggctattggatctctcccttgatgtatgggcaa
aatgcattagtagtgaatgagtttcttgggaaaagctgggcacagattctacctaatgga
gagactctaggagttgcagtcttgaaatctcgtgccgttttcactgaagcatactggtat
tggattggagtaggggcattgattggttatgttttcctgttcaatggtttattcactgtg
gctctcacttatctaaatccatctgggaaacctcaggcaattataactgaagagagtttg
aatgataaaaatgccagcagaaatggagaaatgattgagctatcaccgagaggaaagagc
tccatgggaggtacgtcagctgagtcttcctcttccaatcatcagaacaggaagcgggga
atggttcttccgtttgagcctctttccttcacatttgatgaaatcagatactccgtagat
atgccacaggaaatgaaagcacgaggtgttacagaggataggctggaacttcttagggga
gtgagtggagcttttaggccaggagtccttacatctctaatgggtgttagtggagctggt
aaaaccactttgatggatgtattggctggaaggaaaactggaggatacattgaaggaagc
atcaaagtatctggatacccaaagaaacaagaaacttttgctcgtatatcaggatattgt
gagcaaaatgacatccactctccccatgttacagtctacgaatccttggtttattcggct
tggcttcggttagctccagaaatcaattcttccactagaaagatgttcattgaagaggtc
atggaccttgtagagctggactcattgagggaagcactaattgggcttcccggtgtaaat
ggtctctcaacagagcagcgcaagaggataacaatcgctgttgaacttgttgccaaccct
tcaattatattcatggatgagcctacctctggacttgatgcaagggctgcagcaatagtg
atgagaacagtgagaaacatagtggacactggacgcactgtggtgtgcaccatccaccag
ccaagcattgacatatttgatgcttttgatgagctattcttactgaagcaaggtggagaa
gaaatatatgtgggcccaatggggaagcacgcttgtcatttgatcaagtactttgaggga
atcaaaggagtcagtaagataacagatggttataatccagcaacatggatgttggaggtg
acaacaacagcccaagaagcagctttgggggtcaacttcgccgaaatatataagaactca
gaattgtacaggagaaacaaagaaatgattgatgaattgagtaaacctaccactggttcc
aaagatctctatttctctactcagtactctcagtctttcttcatccaatgtatagcttgt
ctatggaaacaacattggtcatactggcgaaacccaccttacacttttgtaaggatgttc
ttcacaactttcatagctctgatgctcgggtcaatgttttggggtcttggatctaaaacg
cagagggaacaggacttatttaatgcaatgggttctatgtatagtgctgttatatttcta
gggatacaaaatggaggatcagtgcaaccaattgtagatattgaacgtacagtattttat
agggagagagctgctggaatgtattcagctttggcatatgcctttgcccaagtcacgatt
gagattccacatattttcgtccagactttaatatatggagttatagtgtattcaatgatc
ggattccaatggacggttgcgaaattcttttggtatatattcttcatgtatttcacattg
ttatacttcaccttttatggtatgatgacagtgggtattacacccaaccaacacatcgct
tctatagtttcttcggcattctatgcaatatggaaccttttctcaggattcataattcca
agaccaaggattcctatatggtggaggtggtactactgggcttgccctgttgcttggaca
ttgtatggattggtggtgtcacaatttggagatatacaagacacacttgaatcaggggag
ctgacagttcaagaatttctgagtagttattttggattccgacatgattttttaggagtg
gttgcaatcgtagttgttgggttcaatgtgctttttgcattcgtctttgcttttgcgata
aaggcatttaacttccagagaagatag
DBGET
integrated database retrieval system
