Telopea speciosissima (New South Wales waratah): 122645836
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Entry
122645836 CDS
T07910
Name
(RefSeq) TATA-binding protein-associated factor BTAF1-like isoform X1
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
tss
Telopea speciosissima (New South Wales waratah)
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tss03021
]
122645836
Transcription machinery [BR:
tss03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
122645836
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3535
SNF2-rel_dom
Helicase_C
HEAT
HEAT_EF3_N
HEAT_ECM29
TOR1L1_N
HEAT_2
TPR_Trm732_C
HEAT_EZ
UTP20
IFRD
mTOR_dom
Motif
Other DBs
NCBI-GeneID:
122645836
NCBI-ProteinID:
XP_043695154
LinkDB
All DBs
Position
11:complement(41737989..41810576)
Genome browser
AA seq
2080 aa
AA seq
DB search
MAQQSSRLHRLLTLLDTGSTQATRFAAARQIGDIARAHPQDLNSLLRKVSQCLRSKNWDT
RVAAAHAIGAIAENVKHATMTDLFTRVETEMSDGGISAVVDDLIMAWPNFHPKVVAGASF
RSFEISKVLEFGALLASGGQEYDIVGDSNKNPGERIARQKQNLRRRLGLDMCEQFMDVND
MIKDEDLLVEKYNFHGNGMDRRFYTSQSGNRIQQLVANMVPSVISKRPSARELNLLKRKA
KINAKDQTKGWTEDGDFEVSYSQNPGTPKGSSADPLSSSKAFMDAPLDEDGFENDGDGRW
PFHNLVEQLILDMFDPSWEVRHGSIMALREILTHQGSSAGVSLPDLCSKNVWPVDFEDKI
DLSNTKREQEIDLGNTKREQEIDLGYTKREREIDLNIQVGLEESEPSLKRQKTEDVLCEA
ISIMSSVNKDVDLDACVKVKDGVWRSIPGHINGGFDIGLVKMEQEACVDEPQYQHNEGGG
VAENSSFEDNSSIKTLNILKDLPESCKLMKLVKLTRHSWIKNLGFLQDCAIRFLCVLSLD
RFGDYVSDQVVAPVRETCAQALGAALKYMHPSLVHETLNILLQMQCRPEWEIRHGSLLGI
KYLVAVRREMLHDLLGCVLPACKAGLEDPDDDVRAVAAEALIPAATAIVSLNDEILHFIV
VLLWDILLDLDDLSPSTSSVMNLLAEIYSQEEMIPKMFGTVKEKEGFDLNELVQIDEHGA
GLKSEENPYILSTLAPRLWPFMRHSITSVRHSAIRTLERLLEAGCRRSSSESKPSCFWPS
FILGDTLRIVFQNLLLESNEQILQCSERVWSLLLQCPEQDLETAARSYFSSWIELATTPY
GSPLDAIKMFWPVTLPRKSHFKAAAKMRAAKLDNDCSINFGFDSAKGASSLEKNGDVSTN
FVKIIVGADGQKSVTHTRVVTASALGILASKLPEESLQFVIDPLWSNLTSLSGVQRQVAS
MLLVAWFKEIRTRGLVGIHGVMSGFIDQIRQWMLDLLSCTDPSLPTKDSTLPYAELSRTY
TKMRNEASLLLRVIESSTLLKNMLMATKINPDTLSVDDAINFSSKLLVPSNPAAGEETIE
RHFLDDLESSKQRLLTTSGYLRCVQNNLHVTVSAIVAAAVVWMSELPVRLNPIILPLMAS
IKKEQEEILQQKAAEALAELIYHCTTRKPGPNDKLIKNLCSLTCMDPCETPQAAIINSMD
IIDDQDLLSFGRGTVQQKTKVHLPSGGEDRSKVEGFISRRGSERALKYLCARFGGLLFDK
LPKLWDCLTEILKPGNPQGLVPTDDHHMMQAIDSVKDPQILINNIQVVRSIASMLDDSLK
PKLLSLLQCIFTCVHHYHVAVRLAAARCITSMAKSMTVSVMGVVIEKTIPMLGDTTSVHA
RQGAGVLVSLLVQGLGVELVPYAPLLVVPLLRCMSDCDHAVRQSVTHSFAALVPLLPLAR
GIPPPVGLSEGLSKNAEDAQFLEQLLDNSNIDDYKLSTELKVTLRRYQQEGINWLAFLRR
FKLHGILCDDMGLGKTLQSSAIVASDIAEHRASKNGKDPLSLIICPSTLVGHWAYEIEKF
IDPSVMTPLQYVGSAQERISLRCHFEKHNVVITSYDVVRKDIDYLRQQPWNYCILDEGHI
IKNSKSKITTAVKQLKAEHRLLLSGTPIQNNILELWSLFDFLMPGFLGTERQFQATYGKP
LVAARDPKCSAKDAEAGALAMEALHKQVMPFLLRRTKDEVLSDLPEKIIQDRFCDLSPVQ
LRLYEQFSGSDARKEISTLVHVNDSEDTGGHSSSPKASSHVFQALQYLLKLCSHPLLVLG
EKLPDYLSCILSNIMPGIDDIISNLHELHHSPKLVALQEILEECGIGSDASSSEGAAGVV
QHRVLIFAQHKAFLDIIEKDLFQAHMKSVTYLRLDGSVEPEKRFEIVKAFNSDPTIDVLL
LTTHVGGLGLNLTSADTLVFMEHDWNPMRDHQAMDRAHRLGQRKVVNVHRLIMRGTLEEK
VMSLQKFKVSVANAVINAENTSLKTMNTDQLLDLFTSAQTSRKGTTVSKSLDGSFDGDPN
SVGGGKGLKAILGGLEELWDQSQYTEEYNLNQFLAKLNGV
NT seq
6243 nt
NT seq
+upstream
nt +downstream
nt
atggctcaacagtcgtctcgtcttcatcgtttgctcactctattggacactggttcaacc
caagcaacaagatttgcagctgcgcgtcagatcggggatattgcaagggcacatcctcaa
gacttgaactctttgctaaggaaggtatctcagtgtcttcgtagcaagaattgggataca
agggttgctgctgcacatgctatcggggctattgcagagaatgtgaaacatgcaactatg
acagatctatttacacgtgttgaaacggagatgtcagacggtggaatttccgctgttgtt
gacgatctaattatggcatggccaaactttcaccccaaagttgtggcgggggcctctttc
agaagttttgaaatcagcaaggtgttggaatttggtgctttgttagcatctggtggtcag
gagtatgatattgtgggtgacagtaacaagaaccctggggagcgtatagcccgtcaaaaa
cagaatctccgacgccgtttgggtttggacatgtgtgagcagttcatggatgtcaatgat
atgatcaaagatgaagatcttcttgtggaaaagtataacttccatggaaatgggatggac
aggagattctatacatcacaatctggaaatcgtattcagcaactagttgcaaatatggtt
ccaagtgtcatttctaaaagaccaagtgcaagggaattgaatctcttgaaacgaaaagca
aaaataaatgcgaaggatcaaacaaaaggatggacggaggatggggattttgaggtgtca
tattctcaaaatccagggacaccaaagggctcatctgcagatccactgagctctagtaag
gcatttatggatgctcctctagatgaagatggctttgagaatgatggagatgggcggtgg
cctttccataatcttgttgaacaacttatccttgatatgtttgatcccagttgggaggtg
cgccatggaagtatcatggctctaagagaaattttaacacatcaaggttcttctgctgga
gtatctttgcctgacttgtgctcaaaaaatgtgtggccagttgattttgaagataaaatt
gatttgagcaatacaaagagagaacaggaaattgatttgggcaatacaaagagagaacag
gaaattgatttgggttatacaaagagagaacgggaaattgatttgaatatacaagtggga
ttggaggagtctgagccaagcctaaaaagacaaaagactgaagatgtattatgtgaggcg
atcagcataatgtcctctgtgaacaaggatgttgaccttgatgcttgtgtaaaggttaaa
gatggtgtgtggagatccatccctgggcatataaatggtggatttgacatcggtcttgtt
aagatggagcaggaggcttgtgttgatgagcctcaatatcagcacaatgaaggtggtggt
gtggcagaaaatagttcttttgaggataatagttccattaaaacattgaacattcttaaa
gatctccctgaaagttgcaaattgatgaaactggtcaaactgacaagacattcgtggatt
aaaaatctgggattccttcaagattgtgccattcgtttcttgtgtgtattgtcattagac
cgttttggtgattatgtttctgaccaggttgttgcaccagtgcgtgaaacgtgtgcacaa
gcacttggtgctgcgctcaagtacatgcatccttcattagtccatgagacgctgaacatc
ttgctgcagatgcagtgtagaccagaatgggaaatacgtcatggaagccttttgggtatc
aagtatctggttgccgtgcgacgggaaatgcttcacgatttgcttgggtgtgttctccct
gcctgtaaagcagggttagaggatccagatgatgatgttagggcagttgctgctgaagct
ctgatacctgctgcaactgctatagtttctctaaatgacgaaatattgcatttcattgtt
gtgttgctttgggatatcttgcttgatctggatgacctaagtccatccactagcagtgtc
atgaacttattggcagaaatctattcccaggaagaaatgattcctaagatgtttggtacg
gtgaaagaaaaagaagggtttgatcttaatgaattagttcagattgatgagcatggggca
gggctcaagtctgaggagaatccttatattttatctactctggcaccaagattgtggcca
tttatgaggcatagtattacatcagttcgtcattcagccatacgtactttggagcgtctg
cttgaagcgggatgtagaaggagctcttctgagtcaaaacctagttgtttttggccttct
tttattttgggtgatactcttaggattgtttttcagaatcttctccttgaatcaaatgaa
caaattctgcaatgttcagagagggtttggagtctcctactacagtgtccagagcaggat
ttggaaacggctgctagatcatatttctcttcctggatagaacttgctacaactccatat
ggttcacccttggatgctataaaaatgttttggccagtaacccttcctcgtaaaagtcac
tttaaagctgccgctaagatgagagcggcaaagctagacaatgattgcagtataaacttt
ggctttgattctgcaaaaggagcttcttcactagaaaaaaatggagatgtgtctacaaac
tttgttaagataattgttggtgcagatggtcagaagtctgtcactcatacacgagtagtt
actgcttcagctttgggtattctagcttctaagttacctgaagagtctttacagtttgtc
attgatccattatggagcaaccttacctccttgtctggggtccagagacaggtggcttcc
atgcttctcgttgcttggttcaaagagattaggactaggggtttagttggaatccatggg
gttatgtctgggttcattgatcaaattagacaatggatgttggatttgttgtcatgcacc
gatccttcattacctacaaaagattcaacacttccttatgctgagctttcaagaacttac
accaagatgcgtaacgaggccagcctgttgcttcgtgttattgaatcgtctacactactt
aagaatatgttgatggctactaaaattaaccctgatacattaagtgttgatgatgcaatc
aatttttcatctaaacttttggtgccaagtaaccccgcagctggggaagaaactatagag
agacacttccttgatgatttggagtcatcaaagcaacggcttttgacaacttcaggctat
ttaagatgtgttcagaataacttgcatgtcactgtatcagccatagttgctgctgcggtc
gtctggatgtctgagctgcctgtcagacttaatccaattattttgcctttgatggcttct
ataaaaaaagagcaggaggaaatactgcaacagaaggcagctgaagcacttgctgagctt
atttatcattgtaccacacgcaaacctggtccaaatgataagttaattaagaacctttgc
agcttgacgtgcatggatccttgtgagacaccccaagctgcaatcataaattccatggat
attattgatgatcaagatctgctatctttcggaagaggtacagttcaacagaagacgaag
gtacatttgccatctggaggggaagaccgatcaaaggttgaaggcttcataagcagacgt
ggctcagaacgggcattgaagtacttgtgtgcaaggtttggtggtttgctatttgataag
cttcctaaattatgggattgccttactgaaatcctcaagcctgggaatcctcaagggtta
gtgcctacagatgatcatcatatgatgcaagcaatcgattctgtcaaggatccacagatc
ttgataaataatatccaggtggtacgttcaattgcatctatgctggatgattcattgaag
ccaaaattgctctctcttctacagtgtatctttacatgtgtgcatcattaccatgttgct
gtacgattagctgctgcaaggtgtattacctcaatggcaaagtcgatgacagtaagcgtg
atgggggttgtgattgagaaaacaatccctatgttgggggatacaacatctgttcacgcc
aggcaaggagctggcgtgcttgttagtttgcttgttcaagggttgggagtagaactagtc
ccatatgctcctttgttagtagtgcctcttctgcgatgtatgagtgattgtgaccatgct
gtcaggcagagtgtcacacatagttttgctgcccttgtacctcttcttccattagcaagg
ggcattccaccaccagttggattaagtgaaggtttatctaaaaatgcagaagatgcacag
ttccttgagcaactacttgacaactccaatattgatgattacaagctttccactgaattg
aaagtgacactgagaaggtatcagcaagagggtataaactggttggctttcttgagacgg
ttcaagctccatgggattttatgtgatgatatgggactcgggaaaacactgcagtcatca
gctatcgtcgcatctgatatagcagagcaccgtgcgtccaagaatgggaaggatcctctg
tctctaattatttgcccatcaacactagttggacattgggcctatgaaatagagaaattt
attgatccttctgtaatgactcctctacagtatgttggttctgctcaagagcgtatttca
cttagatgtcattttgaaaagcataatgtcgtcataacatcctatgacgtagtccgcaag
gatattgactaccttagacagcaaccctggaattactgtattttagatgagggacatatt
attaagaactcaaagtctaaaattacgactgcggtaaagcagcttaaagctgaacaccgt
cttctattgagtggaacacccatccagaataacatcttggagttatggtcactttttgac
tttctaatgcctgggtttcttggaacagagagacaattccaagccacttatgggaagcca
ctggtagcagctagggatcccaaatgttctgccaaggacgctgaagcaggggcacttgca
atggaagcattacataagcaggtcatgcccttcctcctccgtcgaacaaaggatgaggtt
ttgtctgatttgcctgagaaaattattcaggacagattctgtgatctcagccctgtccag
ttaagactttatgaacagttttctggttcagatgcgagaaaagaaatttccaccttggtt
cacgtgaatgactcagaggatactggaggacatagctcttcaccaaaagcatcttcacat
gtcttccaggcacttcaatacctgctgaagctttgtagtcatccattgcttgtccttggt
gaaaagcttccagattatctctcgtgcattttatccaatatcatgcctggcattgatgac
atcatttcaaatcttcatgaactgcaccactctccaaaattggttgctctccaagaaatt
ctggaagaatgtggaataggctcggatgcttcaagttctgagggtgccgctggtgttgtg
cagcacagggttttgatatttgctcagcacaaagcctttctggacataattgaaaaagat
ttgtttcaagcacatatgaagagtgtcacatacttgaggctggatggctctgttgaacca
gaaaaacgttttgaaatcgtgaaagccttcaattcagaccctaccattgatgtactacta
ctcacaacacatgttggtggacttggattgaacttgacatcagctgacactctcgttttt
atggagcatgattggaatccgatgagagatcaccaggctatggacagagctcataggttg
ggtcaacgcaaagttgtgaatgtccatcgtcttatcatgcgtggaactctggaagagaaa
gttatgagcctccaaaagttcaaagtttcagttgctaatgcagttattaatgcagagaac
accagcttgaagacaatgaatacagaccagttgcttgatctattcacatcagcccagacc
agcagaaagggtactactgtttcaaagagtttagacggtagctttgacggagacccaaac
tcagttggtggtgggaaggggttgaaagctatacttggtggactagaggagctttgggat
caatcacagtacacagaggaatacaatctcaaccagtttctagcaaagcttaatggagtt
taa
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