Telopea speciosissima (New South Wales waratah): 122645903
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Entry
122645903 CDS
T07910
Name
(RefSeq) ABC transporter B family member 2-like
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
tss
Telopea speciosissima (New South Wales waratah)
Pathway
tss02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
122645903
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tss02000
]
122645903
04147 Exosome [BR:
tss04147
]
122645903
04090 CD molecules [BR:
tss04090
]
122645903
Enzymes [BR:
tss01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
122645903
Transporters [BR:
tss02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
122645903
Exosome [BR:
tss04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
122645903
CD molecules [BR:
tss04090
]
Proteins
122645903
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
Zeta_toxin
AAA_29
AAA_22
AAA_16
AAA_21
RsgA_GTPase
DUF87
AAA_30
nSTAND1
APS_kinase
DUF815
HUTI_composite_bact
AAA_15
Motif
Other DBs
NCBI-GeneID:
122645903
NCBI-ProteinID:
XP_043695246
LinkDB
All DBs
Position
11:complement(38508095..38515063)
Genome browser
AA seq
1257 aa
AA seq
DB search
MSFQSPLPDNAKEEKKIDSEDEKEEEEEKEEQKQKKVPFMKLFAFADLQDYILMFIGSIG
ACVHGASVPVFFVFFGKLINIIGIAYLFPASVSHKVAKYSLDFVYLSIVVMFSSWVEVAC
WMHTGERQAAKMRLAYLKSMLNQDISLFDTEASTGEVISAITSDIIVVQDAISEKVGNFL
HYLSRFITGFAIGFSQVWQISLVTLSIVPLIAIAGGVYAYVATGLIARVRKSYVKAGEIA
EEVIANIRTVQAFVGEEKAVLSYKRALKNTYKYGKKGGLAKGMGLGSVHCVLFLSWALLI
WFTSIVVHKEISNGGQSFTTMLNVVIAGLSLGLAGPNISTFVQARAAAYPIFKMIERNTV
SNVSSKVGRTLRKVEGHIQFKDVCFSYPSRPDVVIFDKLSLDIPSGKIVALVGGSGSGKS
TVISLIERFYEPFGGQILLDGNGIRDLELKWLRSQIGLVNQEPALFATTIVENILYGKDD
ATLDEITRAAKLSGAISFINNLPDRYNTQVGERGIQLSGGQKQRIAISRAILKNPSILLL
DEATSALDAESEKSVQEALDRVMVGQTTVVVAHRLSTIRNADMIAVVQGGKIVEIGSHEE
LISNPNGAYATLVQLQGKADPLQHQASQGPVMGRHLSMKLSREVSSATSSFRASAQSDKE
LSLGRCSVDESETIKPKSISWRSIYSMVAPDWIYGVFGIIGAMFAGAQMPLFALGVTDAL
VSYYMDWDTTCREIRKVAFLFCGGAVLTVIFHTIEHLSFGIIGERLTLRVREKMFAAILR
NEIGWFDDISNTSSMLSSRLETDATLLRGMVVDRSTILLQNIFLVITSFIIGFLLNWRIT
LVVIATYPLIVSGHISEKLFMKGYGGNLNKAYLKANMLAGEAVSNIRTIAAFCSEVKVID
LYAHELEEPSKRSFRRGQIAGIAYGVSQFFIFSSYGLALWYGSVLMGKEISSFKSVIKSF
MVLIVTALAMGETLALAPDLLKGTQMLASVFDVLDRKTEVEGDVGEEVTRVEGTIELKDV
EFSYPSRPDIVIFKDFNLKVTVGKSMALVGSSGSGKSSVLSLILRFYDPTAGKVIVDGKD
IKKLKLKSLRKHIGLVQQEPALFATTIYENILYGKDGSSETEVIEAAKLANAHNFISSLP
EGYSTKVGERGVQLSGGQKQRVAIARAVLKNPAILLLDEATSALDVESERVVQQALDRLM
KNRTTVMVAHRLSTIQNADHISILQNGKIIEQGNHSTLIENKKGAYYKLINLQQLQQ
NT seq
3774 nt
NT seq
+upstream
nt +downstream
nt
atgagcttccaaagtcctctccctgacaatgccaaagaagagaaaaagatagattcagaa
gatgaaaaagaagaagaagaagaaaaagaagaacagaagcagaagaaagtcccattcatg
aagctttttgcttttgcagacttacaagattacatcttaatgtttataggatccatcggt
gcttgtgttcatggagcttcagttcctgttttcttcgttttctttggtaaattaataaac
attataggcattgcttatctcttcccagcctctgtttcacataaagtcgccaagtactca
ttggatttcgtctatttgagcattgttgtgatgttctcttcatgggttgaggttgcttgt
tggatgcatacgggagagaggcaagcagcaaagatgagattggcgtatttgaaatcgatg
ttgaatcaagatatcagtctcttcgatactgaagcatcgacaggagaagtgatctctgca
atcactagtgacattattgtagttcaagatgccatctctgagaaggtggggaatttcttg
cattacttaagccgttttattacaggatttgcaattgggttctctcaagtttggcagatc
agtcttgtgaccctgtctatagtccccctgattgccattgctggtggtgtctatgcttat
gtagcaacaggtcttattgctagagtgaggaaatcctatgtcaaggctggtgaaattgca
gaagaggttattgccaatatccgaacggtccaagcatttgtcggtgaagagaaggcagta
ttgtcatacaagagagctctcaaaaacacatataagtatgggaagaagggaggactagcc
aagggtatgggacttggttctgtacactgtgttctcttcttgtcttgggcactgctcata
tggttcactagcattgttgtccacaaggagatatcaaatggtggacaatccttcaccacc
atgctcaatgtcgttatagccggactatcactgggactagctggcccaaacatctcaact
tttgtccaagctagagctgctgcataccccatcttcaagatgatagagaggaatacagtt
agcaatgtcagctccaaagtgggcaggaccctcagaaaagtggaggggcacatacagttt
aaggatgtatgtttcagttatccatctcgccctgatgtagtgatctttgataagctttct
ctcgacataccatcggggaaaattgtagcacttgttggaggaagtggttctgggaagagt
actgtgatctcattgatcgagagattctatgagcccttcggtggacagatactattagat
ggtaatggcattagagatcttgagctcaagtggcttaggagtcaaattgggttagttaat
caggagcccgccctcttcgccacaacaattgttgaaaacatcctatatggcaaagatgat
gcaacacttgatgagataactcgtgctgcaaagctctctggggccatttctttcatcaac
aaccttcctgatagatataacactcaggttggtgaaagagggatacaattatctggtgga
cagaagcaacgaattgcaatatctcgggcgattctaaagaatccttcgatacttctcctc
gatgaggcaacaagtgcacttgatgctgaatctgagaagagtgtccaggaggcattagat
cgtgtcatggtcggacaaaccactgttgtggtggcgcatcggctctccacaattaggaat
gcagatatgattgctgtcgtccaaggtgggaagattgttgaaatagggagccatgaggag
ctgatttcaaacccaaatggtgcttatgcaacacttgtgcagctccaagggaaagctgat
cccttgcagcatcaagcttcacaaggccctgtcatgggacgacatcttagtatgaagctt
tctcgagaagtatcaagcgcgacctcaagttttcgggccagtgctcaatctgacaaggaa
ttatcattaggtcgatgctctgttgatgaatctgagacaataaaaccgaagagcatttca
tggagaagcatatattccatggtggctcctgactggatctatggggtgtttggcatcatt
ggtgctatgtttgctggtgcccagatgccattgtttgctcttggggttacagatgctctt
gtttcctattacatggactgggacacgacatgcagagaaataaggaaggttgcttttctc
ttttgcgggggtgctgttttgactgtcatctttcacaccattgaacaccttagtttcgga
atcattggagagcgattaactctgcgggtgcgagagaagatgtttgcagccatcttgagg
aatgaaattggatggtttgatgacataagcaacacaagttcaatgctctcatcacgccta
gaaaccgatgcaactctactgcgaggaatggttgtcgatcgatctacaattctcttacag
aacatatttcttgttattacctcattcatcattggcttcctcttgaattggaggatcaca
ctagtggtcattgccacatatcctctgattgttagcggccacatcagtgagaaactcttc
atgaaaggttatggtggtaacttgaacaaggcttacctcaaagctaacatgcttgccggt
gaggcagtgagcaacattcgtaccattgctgcattctgttctgaggttaaggtaattgat
ttatatgcacatgagcttgaagagccatccaaacgctccttccgtcgtggccagattgcc
ggcattgcatatggtgtctcccaattcttcatcttctcatcctatggcctagccttgtgg
tatggttctgttttgatggggaaagaaatctctagctttaagtcggtgataaaatcattc
atggttttaattgtaacagcattggccatgggagagacactagcattggcaccagacctt
ctaaaagggacacagatgttggcttcagtctttgatgtattggacaggaagacagaggtt
gaaggggatgttggagaggaagtgacaagagtagagggtacaatagaattgaaggatgtt
gaattcagttacccttcaaggccagacattgtgattttcaaggatttcaatctcaaagta
actgtggggaagagcatggcattagtagggtctagtggatctggtaagagctctgtgctc
tcccttatacttcggttctatgatccaacagcagggaaggtgattgttgatggaaaagac
attaagaaactcaagctcaagtcccttcgaaaacacattggtcttgtccaacaagagcca
gcgctatttgccacgacaatctatgaaaacattctttatggcaaagatggatcatctgaa
acagaggtcattgaggctgccaagcttgctaatgcacataacttcatcagtagcctccct
gagggctactcgaccaaagtaggagagcgaggagtgcaactatcaggtggccagaagcaa
cgggtcgccattgcaagagctgttctcaagaatccagcaattttgcttcttgatgaggct
accagtgctctcgatgtggagtctgagcgtgtcgttcaacaagcccttgacaggctaatg
aagaatcgaacaacagttatggtggcacataggttgtctaccatccaaaatgcagatcac
atatcaattttgcaaaatggaaagatcatagagcaagggaaccactctactctaatagag
aacaagaagggagcctattataagcttattaatttacagcaactgcaacaataa
DBGET
integrated database retrieval system
