Telopea speciosissima (New South Wales waratah): 122646058
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Entry
122646058 CDS
T07910
Name
(RefSeq) autophagy-related protein 11-like isoform X1
KO
K08330
autophagy-related protein 11
Organism
tss
Telopea speciosissima (New South Wales waratah)
Pathway
tss04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
122646058
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tss04131
]
122646058
03029 Mitochondrial biogenesis [BR:
tss03029
]
122646058
Membrane trafficking [BR:
tss04131
]
Autophagy
Cytoplasm to vacuolar targeting (CVT) pathway
Scaffold protein
122646058
Mitophagy
Scaffold proteins
122646058
Mitochondrial biogenesis [BR:
tss03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
122646058
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG17_like
ATG11
IKKbetaNEMObind
TetR_C_1
Motif
Other DBs
NCBI-GeneID:
122646058
NCBI-ProteinID:
XP_043695459
LinkDB
All DBs
Position
11:complement(8870691..8880624)
Genome browser
AA seq
1157 aa
AA seq
DB search
MSLNGPEEFVPGRKLLVRIVENGHTIELVCNEYTLVEAVQRSVESISGIQFNDQILLCQE
MKLEAQRPLSTYKLPCSGREVFVYNRARMLSDSRPPPPEQINIPEVSEPPMPSPTKDPHP
LDDATDPALKALPSYERQFRYHFHRGRAIFNCAELKFKYCERLLREQMVQERAVETAKAS
MDHHYRMICQMYMEFMKCYSQQHRYHSDLLANFERDIDRLRSCKLYPALQTQTRKFLLDF
VKEENLRKWAENCNSSHRQFEAKVMQLKQMFNELKRRVEDLYSSKASAAIRDLKLVIKDH
QRYLNEQKSIMQSLSKDVDTVKKLVDDCLSCQLSASLRPHDAVSALGPMYDVHDKHHLPK
MQACNHSISKLLDFCMGKKNDMNLFVHHCMQKVAYVQFMIRDVRLQYPAFKEAMARQDDH
FEDLKLLRGIGPAYRACLAEVVRRKASMKLYMGMAGQLAERLATKREAEVRRREEFLKAQ
NAFIPRDILTSMGLFDTPNQCDVNIAPFDTSLLDIDDIADVDHYAPEYLVGIRCKGEKHG
TPKASMVMSNDNSNFAEAERNTIESSEKCNSKDVLEGCESVEVAGTSKIEVENARLKAEL
ASAIALMCSFSPEIEYETLDDSKLDSILKNVVEKTAEALHMKDEYGKHLQSMLNMKQMQC
LSYEKRIQELEQRLSDQYMQGQKLPGGKDVFEFGHSSVKADDFKSEISGDGEAHMPYIST
EPMDELSCMSASLDSKPEQFQQQSSKAREGVDENMADSSGLLNPQLDSSMLEPHRDELEA
GDKPGREKMVGQLHLLLSTSSTAETTLEPLNMLPCQAAIEQDSASNLASDLVLELQKALA
DKSNQYNETETKLKAALDELDILKRELEISHKLLDESQMNCAHLENCLHEAREETHTHLC
AADRRASEYSALRASAVKMRSLFERLRSCITATGGVANFSDSLRSLVLSLANSVNDVEDD
FTVEFRTCTRVLADKVGFLSRHRAELLDRCSTAEVAHGRLTKELDEKKELVKSLFAKHQL
EKQTNKEKISFGRFELHEIVAFVINSAGHYEAINRNCSNYYLSAESIALFTEHLPNKPSY
IIGQIVHIERRTVRTPPVRLEPGIDQVDRLSSDTGTYHLSVRSISSSNPYGLSIGCEYFI
VTVAMLPDTNIHSSPPS
NT seq
3474 nt
NT seq
+upstream
nt +downstream
nt
atgagtttgaatggtccggaggaatttgtaccaggaaggaagctactggttcgaatcgta
gagaacggccatactatcgaacttgtttgcaatgaatacacgctggttgaagcagttcag
agatctgtagagtcaatttctgggattcaattcaatgatcaaattctcctctgccaagag
atgaagcttgaagctcaacgacccttgtcgacgtacaagctcccctgtagtggccgcgaa
gtctttgtctacaaccgagctcgaatgctttctgattcgcggccgcctccgccggagcaa
atcaatatccctgaagtcagtgaacctccaatgccttcccctactaaagaccctcaccct
ctggatgatgctactgatcctgctctcaaggcattgccttcatatgagcgtcagtttaga
taccattttcaccgtgggcgtgctatattcaactgcgccgaattgaagtttaagtattgc
gagaggcttctgagagagcagatggtgcaagagagggctgtggagactgccaaggctagc
atggatcaccactatcggatgatatgccaaatgtacatggagttcatgaagtgttactcc
cagcagcatcgataccattctgaccttttggcgaattttgagcgggatatagatagactg
agatcttgcaagctttatccagctttgcagacacaaactcggaagttcttgcttgatttt
gtgaaggaggagaatttacggaagtgggctgagaattgtaacagctcacaccggcagttt
gaggctaaggttatgcagttaaagcagatgttcaatgaactgaagcggcgggttgaggat
ctttactctagtaaggcttcagctgcaataagggatttgaagttggtgataaaggaccac
caacgatatctaaatgagcagaagagtataatgcaatcgttgagtaaagatgttgacact
gtgaagaaactagtcgatgattgtctgagctgccaattatctgcctccctccgtcctcat
gatgcagtttcagctcttggtccaatgtatgatgtccatgacaagcaccacctaccaaaa
atgcaggcttgcaatcattcaatttcaaaactgctcgatttctgcatgggtaaaaagaat
gatatgaaccttttcgtgcatcattgcatgcaaaaggtagcttatgttcaatttatgatc
agagatgtccgtctacaatatcctgcttttaaagaagcaatggcacgccaagatgatcat
tttgaagatctaaagttgctgcgtgggattgggcctgcatacagggcatgccttgcagaa
gtagtgaggaggaaggcttcaatgaagctttacatgggcatggctggacaattggcagaa
agacttgcaacgaagagggaggctgaggtaagaaggcgagaggaatttttaaaagcacag
aatgccttcattcctcgggatatattaacatccatgggattgtttgatactccaaatcag
tgtgatgtcaatatagctccatttgacactagtttgcttgatattgatgatattgctgat
gttgaccattatgctcctgagtatttagttgggatccgttgtaaaggagagaagcatgga
acaccaaaagcgtccatggtgatgtcaaatgacaattctaactttgctgaagctgaaaga
aataccatagaatcatctgaaaaatgcaactctaaggatgtgctcgagggctgtgagtca
gtagaagttgctggaacaagtaaaattgaagttgaaaatgcgagactgaaagctgaactt
gcttctgcaatagctctgatgtgttcttttagtcctgaaattgaatatgaaacactagat
gacagtaagctggatagcatactgaagaatgtggtggagaagacagcagaagccttgcat
atgaaggatgagtatggcaaacatctccagtcaatgcttaacatgaagcagatgcaatgc
ttgtcttatgagaagcgcattcaagagctggagcagagactgtccgatcagtatatgcaa
gggcagaaacttccaggtggaaaggatgtctttgagtttggccattcatctgtgaaggct
gatgacttcaaatcagaaatatcaggtgatggagaagcccacatgccttacatctctact
gaacccatggatgagctttcttgcatgtctgcatcattggattccaaaccagagcagttt
caacagcaatcaagcaaagcacgagaaggtgtggatgaaaatatggctgattcttcaggt
ttactaaatcctcagctggattcttcaatgttggagccacatcgagatgagctggaagca
ggtgataaaccaggacgagagaagatggtggggcagttgcatttgctactatcaaccagc
tccactgctgaaaccacattggaacctctgaacatgttgccttgtcaagctgcaattgag
caagattcagcatctaacttagcgagtgatcttgtattggaactgcagaaagcgctagca
gacaagtcaaaccagtacaatgagactgaaaccaagcttaaagctgctctagacgagttg
gacattctgaagagagaactggaaatcagccataagctgctggatgaatctcagatgaat
tgtgctcacttggaaaattgcctgcatgaagctagagaggaaacccatactcatctttgt
gctgctgataggagggcctcagagtatagtgcactgcgggcttctgctgtgaaaatgcga
agcctttttgaaagattgcgaagttgcattactgcaacgggtggagtggctaatttttct
gattccttgcgttctttggttctttcattggccaattctgtcaatgatgttgaagatgat
tttactgtggagttccgaacgtgtacccgggtccttgcagacaaagtgggttttctgtct
cgacaccgtgcagagctgttggacaggtgctcaacggctgaagttgcacatgggcgcctt
acaaaggagctggatgagaagaaagaactggttaaaagcttatttgcaaagcatcaactc
gagaagcagacaaacaaggagaagatatcatttggtcgttttgaactccatgagattgtc
gcctttgtcatcaactctgctgggcactatgaagcgatcaacaggaactgctctaactac
tatctatctgcagaatctattgccttgtttacagagcacctcccaaacaaaccaagttac
atcattggtcagatagtgcacatagaacggagaactgtgaggacaccacccgttcggctt
gagcctgggatagatcaagttgatcgcctgagctctgatacagggacttaccatttgtct
gtgagatcgatatcctcgtcaaacccatatggcctctctattggttgcgagtatttcata
gttacagtagcaatgctacctgacacgaacattcattcgtcacctccttcctga
DBGET
integrated database retrieval system
