Telopea speciosissima (New South Wales waratah): 122646100
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Entry
122646100 CDS
T07910
Name
(RefSeq) eukaryotic peptide chain release factor GTP-binding subunit ERF3A
KO
K03267
peptide chain release factor subunit 3
Organism
tss
Telopea speciosissima (New South Wales waratah)
Pathway
tss03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
122646100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tss03019
]
122646100
03012 Translation factors [BR:
tss03012
]
122646100
Messenger RNA biogenesis [BR:
tss03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
122646100
Translation factors [BR:
tss03012
]
Eukaryotic type
Release factors
122646100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
EF-G_D2
G-alpha
Motif
Other DBs
NCBI-GeneID:
122646100
NCBI-ProteinID:
XP_043695516
LinkDB
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Position
11:complement(5090373..5127747)
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AA seq
523 aa
AA seq
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MDIDAEIESSIRSLQLDSSEGNNEVVASDEVKAEESEKWDTMEEDLKDEVVSDHKDEPPS
NSKPLHVEPKVKDKEMTALVDVEDKDSKEENKKRHLNVVFIGHVDAGKSTTGGQILFLSG
QVDDRTIQKYEKEAKEKSRESWYMAYIMDTNEEERVKGKTVEVGRAHFETEASRFTILDA
PGHKSYVPNMISGASQADVGVLVISARKGEFETGYERGGQTREHVQLAKTLGVSKLLVVV
NKMDDPTVGWSKERYNEIESKMIPFLKSSGYNVKKDVLFLPLSGLVGSNMKTRVEKSVCP
WWNGPCLFEALDAIELPPRDPKGPLRIPIIDKFKDMGTVVMGKIESGSIHEGDSLLVMPN
KAHVKVIAVHCDENKVRRAGPGENVRVKLSGVEEEDVLSGFVLSSAVKPIVAVSEFDAQL
QILELLENAIFTAGYKAVLHIHSVVEECEIVELLQQIDPKTKKPMKKKVLFVKNGAVVVC
RVQVNNLICIEKFADFPQLGRFTLRTEGKTIAVGKVTGLPNTA
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atggatatagatgctgagatcgagtctagcattaggtcgctgcagttggactcttcagag
ggcaataacgaagtggttgcttcagatgaagttaaagcagaagagagtgagaaatgggat
acaatggaagaagatctcaaggatgaggtggtttcagatcacaaggatgagcccccgtca
aactctaagccattgcatgtggagccaaaagttaaagataaagaaatgactgctctagta
gatgttgaagataaagatagcaaagaagaaaacaagaagcgacatctgaatgttgtattt
attggccatgttgatgctggtaagtccacgactggagggcagatacttttccttagtggt
caggttgacgatcgaacaatccagaaatatgagaaagaagcaaaggaaaagagtcgagaa
agttggtacatggcatatatcatggacacaaatgaggaggagcgtgtaaagggaaagaca
gtggaggttggtagagcacatttcgagacggaagcctcaaggtttaccattctggatgca
ccgggtcacaaaagttatgttccaaacatgatcagtggggcatctcaagcagatgttgga
gtcctggtaatctctgctcgtaaaggtgaatttgaaactggatatgagagaggtgggcag
acccgtgaacatgtccaacttgcaaagactttgggtgtatctaagttgcttgttgttgtc
aacaaaatggatgatcctactgtgggatggtctaaagaaaggtataatgaaatagaatca
aagatgatacctttcctaaaatcatcaggttacaatgtgaagaaagatgttctattcctt
cctttatctggtttagttggttctaatatgaaaactagagtcgagaagagtgtgtgcccg
tggtggaatggtccgtgcctatttgaagctttagatgccatagaacttcctccacgagat
ccaaaaggcccattgaggattccgattattgacaaatttaaagatatgggaactgttgtt
atggggaagatagagtctggtagcattcatgagggtgatagcttgttggtcatgccaaat
aaggcccatgttaaagtgattgctgtacattgtgatgagaataaagtaagacgtgcaggc
cctggtgaaaatgtccgtgtaaaattgtctggggttgaagaagaggacgtattgtctggt
ttcgtcttgtcatctgctgtgaaaccaatagttgcagtttcagagttcgatgcccagttg
cagatccttgagctattggaaaatgcaattttcactgctggttacaaggcggtactgcat
attcattctgttgttgaggagtgtgagattgttgagctgttgcagcaaattgatccaaag
accaaaaaacctatgaagaagaaggttctttttgtcaagaatggtgctgttgttgtttgt
cgtgtacaggtcaacaacttaatttgcatagagaagttcgctgattttccacagcttgga
aggtttactcttcgtactgaagggaaaacaattgcagtggggaaagttactggtcttcca
aatacggcatag
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