Telopea speciosissima (New South Wales waratah): 122646198
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Entry
122646198 CDS
T07910
Name
(RefSeq) NF-X1-type zinc finger protein NFXL1-like
KO
K12236
transcriptional repressor NF-X1
Organism
tss
Telopea speciosissima (New South Wales waratah)
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tss03000
]
122646198
04121 Ubiquitin system [BR:
tss04121
]
122646198
Transcription factors [BR:
tss03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
122646198
Ubiquitin system [BR:
tss04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
NFX1 proteins
122646198
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_NFXL1
zf-NF-X1
NCBP3
R3H
Motif
Other DBs
NCBI-GeneID:
122646198
NCBI-ProteinID:
XP_043695632
LinkDB
All DBs
Position
11:52161673..52165119
Genome browser
AA seq
1091 aa
AA seq
DB search
MSHQRRDDRREGSRIPARSARQEWIPRGSTATVVNPPNPPPISNSNESNPNGNGGDSNYS
SAPTGGRHRGGFVRRSYTARPSYPMKEPEILEPKVFDVPQLVQEIQDKLAKRAVECMICY
DMVGRSAQIWSCSSCYSIFHLNCIRKWARAPTSVDLSVDKNQGVNWRCPGCQSVQLLTAK
EIRYVCFCGKRPDPSMDLYLTPHSCGEPCGKPLEREVAGGGDCNEDDRCPHVCVLQCHPG
PCPPCKAFAPPRRCPCGKKTITTRCSDRKSMHTCGQPCNKLLECGRHRCEQSCHKGTCDP
CRVLIKALCFCKKKVEVLLCGEMTVKGDVRQIDGVFSCNSTCGKKLACGNHFCVDNCHPG
PCGDCELTPWRIKTCYCGKTKIQNERRICIDPIPTCLQICGKHLPCRIHHCKELCHAGEC
PPCLVPVNQKCRCGSSSRTVECYITMDEKEKFICDKSCGRKKNCGRHRCSERCCPLSSSN
NQVSGDWDPHLCSMVCGKKLRCGQHSCVSLCHSGHCPPCLETIFTDLTCACGKTSIPPPQ
PCGTPPPSCQHPCSVPQPCGHPSSHSCHFGDCPPCSIPVAKECIGGHVVLRNIPCGSRDI
RCNQLCGKTRQCGMHACGRTCHPSPCESSSGSGGKASCGQVCGAPRRDCKHICTATCHPS
APCPDLRCDFPVTISCSCGRITASVPCDAGGSGHVDTVFEASVIQKFPVLLQAVEATGKR
VPLGQRKLTCDDECAKLERKRVLADAFDITPPNLDALHFGEHSTVSDVLADVYRRDPKWV
VSIEERFKFLVLGKTKGGSSNGLRVHVFCPMLKDKRDAVSQIAERWKLSINAAGWEPKRF
LVVHVTPKSKAPSRFLGAKVTGPVPVSHPVFDPLVDMDPRLLVSLLDLPREADISALVLR
FGGECELVWLNDKNALAVFSDPARAATALRRLDHGSEYHGAAVVLQNGSTTSSGANAWVT
GAAKDGGVVTTLKGNPWKKAVVQEPSWREDSWGVEDWPGASADVLVSAWKGKEAPIASSR
NRWDVLDSNSVSDSTATSSIGTDNTGNLRVASSSRSEQESKTSGSNSTVQPGLLNKTELS
EVADDWENAYD
NT seq
3276 nt
NT seq
+upstream
nt +downstream
nt
atgagccatcaacgccgagatgatcgaagagagggatcccgtattcctgctcgtagtgcc
cgtcaagaatggattcctagaggatctactgctactgttgtcaacccacccaatccacct
ccgatttccaattcaaatgaatcaaatcccaatggaaacggtggagactcgaattatagt
tccgcccctactgggggtcggcatagaggtggctttgttcggcgaagctacacggctcgg
ccttcgtatccaatgaaagaaccagagattctggagcctaaggtgttcgatgtcccgcag
cttgtgcaagaaattcaagataagctcgcgaaaagggcggttgaatgcatgatttgttat
gacatggtagggaggtctgcccaaatatggtcgtgctcgagctgttactccattttccat
ctcaattgtataaggaaatgggctcgagcaccgacttctgttgatttgtctgtggataag
aaccagggcgtgaattggcggtgccctggttgtcagtctgtgcagctgctgacagcgaag
gagattcgatatgtttgtttctgtgggaagcgaccagacccctctatggatttgtatctg
acgccgcattcatgtggagaaccctgtgggaagccattggagagggaggttgcaggcggt
ggcgattgcaatgaagatgatcgttgcccccatgtttgtgtcttgcagtgccatccgggt
ccatgccctccgtgtaaagcttttgctccaccccggcggtgcccttgtgggaagaagacg
attacgactagatgctctgatcggaagtcaatgcatacttgtggacaaccctgtaataag
cttctggaatgtgggcgtcacaggtgtgagcagagttgccacaagggaacgtgtgatcct
tgtcgggttttgatcaaagcattgtgtttctgcaagaagaaggtggaggttcttctttgt
ggagagatgactgttaagggggatgttaggcagattgatggtgttttctcgtgtaattcc
acttgtggcaagaaacttgcttgtggaaatcatttctgtgtcgacaattgccatcctggt
ccgtgtggggattgcgagttgacgccttggaggatcaagacctgctactgtggcaaaacg
aagatacagaatgaaaggcggatttgcattgacccaatcccgacctgtttgcagatttgt
ggtaagcatcttccttgtaggattcaccattgtaaggagttgtgccatgctggggagtgt
ccaccttgtctggttccggtcaaccaaaaatgccgttgtggttcttcctctcgaactgtt
gagtgttacataacaatggacgagaaggaaaagtttatctgtgataagtcttgcgggcgg
aaaaagaactgtgggagacacaggtgcagtgaaaggtgttgccctctctctagttccaat
aaccaggtttcgggcgattgggacccgcatttgtgctcgatggtatgtgggaagaagctg
aggtgtgggcagcattcttgtgtgtcactgtgccatagcggtcattgcccaccttgcctt
gaaaccatcttcactgacctgacctgtgcttgtgggaagacttcaatacctcctccccag
ccttgtggcacacctcctccttcttgtcagcacccatgctcagttccccagccctgtggt
catccatcatcacacagttgccattttggtgattgcccaccttgttctattccggtggca
aaggaatgcattggtggtcatgtcgttctcaggaacataccttgtggttcgagggatatt
cgatgtaatcagctgtgtggcaagacacgacagtgtggtatgcatgcttgtggcagaact
tgtcatccttcaccatgtgagtcttccagtggctctggtggaaaggcttcttgtggtcaa
gtttgtggtgctcctaggagagactgtaagcacatatgcactgctacttgtcatccatca
gctccctgtcctgatctaagatgtgatttccctgtgacaatctcatgttcctgtggtcgg
ataactgcctcagtaccttgtgatgccggaggcagtggtcatgttgatactgttttcgaa
gcatctgttattcaaaaatttccagttctacttcaagctgtggaagcaaccggcaagagg
gtcccgcttggacagagaaagctcacctgtgacgatgagtgtgcaaaattggagcgaaaa
cgggttcttgcagatgcttttgatatcactcccccgaacttggatgctcttcattttggt
gagcactctacagtttctgatgtgcttgctgatgtgtatagaagagacccaaaatgggta
gtgtctattgaagagaggttcaagtttctagtacttgggaagactaaaggagggtcctca
aatggtctcagggttcatgtattctgtccaatgctgaaggacaaaagagatgctgtaagc
caaattgcagagagatggaagctttcaattaatgcagcagggtgggagccgaagcggttc
cttgtggttcatgtcactccaaaatctaaagctccatcccggtttcttggggccaaggtt
actggccctgttcccgtgtctcatccagtttttgatccattagttgacatggatccacga
cttcttgtgtctttgctggatttgccaagggaggcagatataagcgctttggtcctgagg
tttggtggagagtgtgaactggtctggttgaatgacaaaaatgctttggcagtatttagt
gatcctgcccgagcagcaactgctttgaggcgattagatcatggttcagagtatcatggt
gctgctgtagttcttcagaatggttctacaacatcttccggcgccaatgcatgggtaact
ggggctgcaaaggatgggggtgtagttacaaccctgaagggtaatccatggaaaaaggct
gttgtacaggaacccagttggagggaggactcctggggtgttgaagactggcctggtgct
tcagctgatgtgctcgtgtctgcctggaaagggaaagaagcaccaatagcttcttcaaga
aatagatgggacgttcttgactcaaattcagtttctgattccactgctacctcttctatt
ggaactgataatacagggaatcttcgagtggcaagttcttcccgttcagaacaggaatca
aaaacttcaggttcaaactcaacagtgcaacctggactacttaacaagacggagttgtct
gaagtagcagatgactgggagaatgcttatgattga
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