Telopea speciosissima (New South Wales waratah): 122646244
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Entry
122646244 CDS
T07910
Name
(RefSeq) RRP12-like protein
KO
K14794
ribosomal RNA-processing protein 12
Organism
tss
Telopea speciosissima (New South Wales waratah)
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tss03009
]
122646244
Ribosome biogenesis [BR:
tss03009
]
Eukaryotic type
90S particles
Other 90S particles
122646244
Pre-60S particles
Other pre-60S particles
122646244
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_RRP12_N
RRP12_HEAT
PP4R3
TPR_IMB1
ARM_TBCD
Motif
Other DBs
NCBI-GeneID:
122646244
NCBI-ProteinID:
XP_043695681
LinkDB
All DBs
Position
11:51644299..51660395
Genome browser
AA seq
1288 aa
AA seq
DB search
MEGLEFHEPQIPMEESEDLCNSILSRFGNSAQEDHQHLCLVIGTMSQELKDQGLPLTAIA
YFGATVSSLNRLSNEPGASDPKIPAFLTLLSMILPRVSGAVLRKKRDFVSEPLVRVLHRD
SVNVGAVTSGLKCISHLLIVSDKDIWSDSNPYCLQNLYSVVLRFVTNSDDKIRRQSHTCL
CDVLRSFQGSLVLARASDEITKIFAKFFLLAGGSNPNASERPKGAQEVLHILYALKDCLP
LMSFKSTTGILKYFKTLLEVRQPIVIRRITDCLHALCIYPTSEVCPEALLDLLCSLASSI
SADEKSVDGMTFTARLLDSGMRKVYALNRQLCVVKLPLVFNALGEILACEHEEALFAAVE
ALKSLIIACIDERLIKQGVDQIMVNTEIDARRSQPTVIEKICATIESLLGYQYIAVWDMV
FQVVSTVFDKLGEYSSYLLRGTIKGLADMQKLPEEDLPSRKQLHECLGSALGAMGPETFL
SLIPLNLEAEDLSEVNIWLLPILKHYTVGAHLSFFTKSILGMVGLMRQKSRKLEQEGRIV
SARSAEALAYSLWSLLPAFCNYPLDTAKSFKDLKKALCSALREEPDVHGIICSSLQILIQ
QNKRLLEENKDQSNDEISIPEQRARAYYTPQVAADNLNALKSSAREFLSVLSGIFMHSSK
DSGGSLQSTIGEFASISDKEVVKKFYKTTMQKLLEVTKEAAKAEQSRNSAMQIDGAGTEH
SPSLARAQVLDLAVSLLPGLDVEGVDVLFYAIKPALRDDEGLIQKKAYKILSIILRDRGE
FLSTKLDDLLGLMIEALPSCHFSAKRHRLDCLYFLTVYVSKDATEQRKSNIISSFLTEII
LALKEANRKTRNKAYDILVEIGHACGDENRGGKKEFLLQFFNMVAGGLAGETPHMISAAV
KGLARLAYEFSDLVSAAYNLLPSAFLLLQRKNREIMKANLGLLKVLIAKSQADRLQTHLR
SMVEGLLLKSQDDAKNHFKAKVKHLLEMLVKKCGLQAVKAVMPEEHMKLLTNIRKINERK
ERKSSGNSEDEARSRLSKASTSRLSGWNHTKIFSDFGDEDSEGSDAVYMEATTVGGHRSK
AAQSKLSLLRSKRTQRAAKSLPEDFSAQLGDDPLDLLDQQKTRSALRSSGHLKRKPDSDD
EPEIDSEGRLVVREEGKPKKREFPADPDMDVRSQGSSHVSAKTKSSKQTEKKRRKTSETG
WAYTGNEYTSRKAGGDVTRKGKLEPYAYWPLDRKMLSRRPEQRAAARKGMASVVKLTKQF
EGKSASSALLVKAMKFKRSQKKSSKKSR
NT seq
3867 nt
NT seq
+upstream
nt +downstream
nt
atggagggcttggaatttcacgaaccccaaattcccatggaagaaagtgaagatctttgc
aattctatcctctcaagattcggtaattcggcacaggaagaccatcagcacctctgctta
gtcatcggtaccatgtcccaggaactcaaagatcaaggacttccattaacagctatagct
tactttggcgcaacagtttcttcacttaatcgactttccaatgaacccggagcttctgat
cctaaaatcccagcttttcttactcttctatcaatgattcttccgagggtgtcaggtgca
gttttgagaaagaagagagattttgtttcggaaccgttagttcgtgtccttcaccgtgac
tccgtgaatgtaggagctgtgacgtcgggattgaagtgcatttcgcatttgcttattgtc
agtgataaggatatctggtcggattctaacccttattgtcttcaaaatctttattctgtt
gttctgagattcgttaccaattctgacgataagataagaaggcaatcacatacatgtctt
tgtgacgtcctacggagctttcaagggtcactggtgctggcacgtgctagtgatgaaatc
acaaaaatctttgcaaaatttttcctacttgctggtggatcaaatcctaatgcttcagaa
aggcccaaaggagcgcaagaggttctacatattctgtatgctttgaaagactgcctacct
ctaatgtcctttaagtccacaacaggcattctaaagtactttaagactctcttggaagtg
cgacaacccattgttattagacgaataacagattgtttgcatgcactttgtatctatcca
acatcagaagtttgtcctgaagctctgctagatctgttatgctctcttgcatcatctatt
tctgctgatgagaagtctgtggatggcatgactttcactgcacgcttactagatagtggc
atgcgaaaagtttatgccttgaataggcaactctgcgtggttaagcttcctcttgtgttc
aatgcgcttggagaaattttggcatgtgagcatgaggaggctttgtttgcagccgtggaa
gcattaaagagtctaataattgcgtgcattgatgaaaggttgatcaagcaaggggtggat
cagattatggtcaatactgaaattgatgcaagaaggtcacagccaactgtcatcgaaaaa
atatgtgccacgattgaaagcttacttggttatcagtacattgcagtttgggacatggtg
tttcaggttgtttcaacagtgtttgataaactaggagaatattcctcgtatctattgaga
ggaaccattaagggcctagcagatatgcagaagctaccagaggaagacctcccttccagg
aaacagcttcatgaatgtttaggatcagctcttggtgcaatggggcctgaaactttttta
agcttaataccccttaatttggaggcagaagacctctctgaggttaatatttggctgctt
ccgattttgaagcattatactgtgggcgctcatttgagcttctttacaaagtcaatcttg
ggcatggtaggactgatgaggcagaaatcccggaagcttgagcaagaggggcggatcgtc
tcagcaagaagtgcagaagcacttgcatattcactgtggtccttgttgcctgccttttgc
aattatcctttagatactgctaagagtttcaaggatctcaaaaaagcgttatgcagtgcc
cttcgtgaagagcctgatgtacatgggatcatatgttccagtctgcagattctcattcaa
cagaataagagattgctggaagagaataaggatcagtctaatgatgaaataagtattcct
gaacagagagctcgggcatattatacgccacaagttgcagcagataatttgaatgccctg
aagtcttctgctcgtgagttcttgtcagttttatcagggatcttcatgcattcttcaaaa
gatagtggtggatctttgcagtccacaatcggcgagtttgcttccatatcagataaggaa
gtagtcaagaagttctacaaaactacaatgcagaagcttttggaggtgacgaaggaggct
gctaaggctgaacagtccagaaacagcgctatgcagattgacggtgcagggactgaacat
tcaccatctcttgccagggcacaagtattggatttagctgtatctcttctgcctggtttg
gatgttgaaggggttgatgttttattttatgcaataaaaccagcattaagggatgatgaa
ggtttgatccagaaaaaggcgtacaaaattctttcaattattctcagggatcgtggtgag
ttcctttcaaccaaacttgatgacttgctaggactgatgattgaagcactgccatcctgt
cacttctcagccaaacgtcatagacttgactgcttatatttcttaactgtctatgtttcc
aaggatgcaacagaacagaggaaaagcaacatcattagttctttcctaactgagataata
cttgcactgaaagaggctaataggaaaacaagaaataaggcttatgacatccttgtcgaa
attggtcatgcatgtggagatgaaaatagaggcggcaaaaaggagtttttgctgcagttt
tttaacatggttgctggaggcctggctggtgaaacaccacatatgatcagtgctgcagtg
aaaggcttagctcgccttgcttatgaattctcagatcttgtctcagcagcttacaatttg
cttccatctgctttcctcctcctacagagaaagaacagagaaataatgaaggctaattta
ggtctactaaaggtattgattgccaaatcacaagctgaccggttgcaaacacacttgaga
agcatggtcgaaggactgttgttgaagtcccaagatgacgctaagaaccattttaaagcc
aaggtcaagcatctccttgaaatgcttgttaagaaatgtggtctacaggctgttaaagct
gtaatgcccgaagaacacatgaaactccttacaaatatccggaagataaatgaacggaaa
gagcggaaaagttcaggtaattctgaggacgaagctagatctcgtctttcaaaagcatcc
acatccaggcttagtggatggaatcatacaaaaatattttctgattttggggatgaagac
tctgagggcagtgatgcagtgtacatggaagctacaacagttggtggtcaccgcagcaag
gctgctcagtccaaattgtctttattaaggtcaaagagaactcaacgagcagccaaaagc
ttgccagaggatttttctgcccaattaggagatgatccacttgacttactggatcaacaa
aagacaaggtcggccctcagatcctctggacacctcaaacggaagccagattcagatgat
gagccagagattgactctgaaggacgcttggtagtccgtgaggaaggaaagccaaagaag
agagagttccctgctgatcctgacatggatgtcagaagtcaagggagcagccatgtgtct
gcaaagacaaagtcttccaaacaaaccgaaaagaagcgcagaaagacatcagaaactggg
tgggcatatacggggaacgagtacactagtaggaaggctggtggcgatgtgacgagaaag
ggaaagcttgagccatatgcatactggccacttgatcgcaaaatgttaagccgtagacca
gagcagcgagcagctgcaaggaagggtatggctagtgtggtaaagctgacaaagcagttc
gaaggcaagagtgcatcaagtgcactgttggtgaaggctatgaagttcaagaggagtcag
aagaagagcagcaaaaagagcaggtag
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