KEGG   Telopea speciosissima (New South Wales waratah): 122646264
Entry
122646264         CDS       T07910                                 
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog isoform X1
  KO
K15075  DNA repair/transcription protein MET18/MMS19
Organism
tss  Telopea speciosissima (New South Wales waratah)
Brite
KEGG Orthology (KO) [BR:tss00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:tss03036]
    122646264
   03400 DNA repair and recombination proteins [BR:tss03400]
    122646264
Chromosome and associated proteins [BR:tss03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    122646264
DNA repair and recombination proteins [BR:tss03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     122646264
SSDB
Motif
Pfam: MMS19_N MMS19_C HEAT_EZ HEAT_2
Other DBs
NCBI-GeneID: 122646264
NCBI-ProteinID: XP_043695720
LinkDB
Position
11:complement(15149255..15251332)
AA seq 1148 aa
MAKPSSWIQHVEAFVDVSRPPNQQIVSVDAVASLLKNGLVTIETLVREMEMYLTTTDNVI
RARGILLLGEVLTRLTANPLNNATVHSLIRFFTERLADWQALHGALLGCLALLKRKSNAG
MVTGSDAKAVAESYLQNLQVQSLGQHDRQMCFELLECLLSGYPNDVATLGDDLVYGICEA
IDGERDPKCLMLTFHLVEILAQLFPDPSGPLASYASDIFEILSSYFPIHFTHPKSDDLYV
KRDDLSRALMLAFSSTPFYEPFAIPLLLEKLSSSLPSAKVDSLKYLSSSASKYGVDRMEK
HSRAIWMSLKDTIFSSSSEDVLSLASESPDAMGFQENEVVKEGLVCLYHVILQNERLFTN
LIVEDEDVEMIFRSVTSCRSYNGITVENRKKLQALGRIISVSAKVSSSSCSRIFQSFFIR
LMDILGVSSDGSGFLSEKLNSGALYLCIELLAACKDLVLDSGEPAPESFSLEDTWCNLLQ
KFSAPLTDAFSSILVSSMEQGFSEDIYTGVKGLQSLATFPGFLPILKPVYENILAIFMSI
ITSGCEITLLWKLSLKALVQIGIFIEKYHDSEKALSYMNIVVEKFIKLIHNDDSVMSLQL
KLEAATDIGSTGKDVMLRIAQGMEEAISTSFYEACVKGNLKSVEILVPVLECYSTKVLPW
FHKTGEFEKVVLNFAINIWIQIESIMTFNICFREKELLDATVMAMNLAVGICSEENQSMI
VQKAYDVLSLATFLPLNESVPLSAPVKLEGLQCSQDFCSFSSTDEWLISLFASVIMAVRP
QTEIPNVRFILKLFMFALLRGQVPAAQALGSMINKLPVKLNSTEGSSTCTLEEAMDIIFE
ANLWSLSGNVPLRKCSTMDRNKVAIATLFLNSHENVNVQTQAIVGLAWIGKGLLMRGHEK
VKEITMLFLGCLLSSGEIGILPLQQDSLGDFNGQDIDPVVMRSAADAFHVLLGDSEVCLN
KRCHASIRPLYRQHFFSIMMPILLFSIAESDSSTSRRMLYRAFAHFISGTPVVAVVAEAK
KLIAVILDALSMLSMDVLDKDLVYSLLLTLSAILTDENERDTVSENAHIIVDCLIGLASY
SHMMLVRETAIQCLVALSGLPYVRIYPMRTKVLRAILKALDDPKRIVREEAVRCRQAWAS
IASRSIHF
NT seq 3447 nt   +upstreamnt  +downstreamnt
atggcgaaaccgagctcttggattcagcatgtcgaagcctttgttgatgtctctcgtcct
ccgaatcaacagattgtaagtgtagatgctgtcgcttcacttttgaagaatggtctcgta
actatagaaacactagtcagggaaatggaaatgtatttgacaactacagacaatgtcatt
cgtgctagaggtatcctccttctaggagaagtgcttacacgtcttacagcaaatccacta
aacaatgctactgtacatagcttgataaggttcttcacggaaaggctggcagattggcaa
gctttacatggtgcccttcttggttgcttggcactcttgaaaaggaaaagtaatgctgga
atggttactggcagtgatgcaaaagcagttgctgaatcttacttgcagaatctacaagtg
cagtcattaggacagcatgaccgtcagatgtgctttgagcttcttgagtgtcttttaagt
ggctatcctaatgatgttgcaaccttgggtgatgaccttgtttatggtatatgtgaagca
attgatggagaaagggatcctaaatgtttaatgctcacttttcatcttgtggaaattctt
gcacaattatttccagatccttctggtccgctagcaagttatgcctccgatattttcgag
attttgagttcttactttcccatccacttcacacatccgaaaagtgatgatctctatgtt
aaaagggatgacctttcaagggcgttaatgcttgcattctcttcaactcctttttatgag
ccttttgctatcccgttacttcttgaaaagttatcttcttctctgccatctgcaaaggtt
gattctttgaagtatctcagttcttctgcatcaaaatatggtgtggatagaatggaaaaa
catagcagagctatttggatgtctttaaaggacacaattttttcttcgtcaagtgaagat
gtattatcattggcatcagagtcgcctgatgctatggggttccaggagaatgaagttgta
aaagagggtctagtttgtttatatcatgttattttgcaaaatgaaaggttatttacaaat
ttgattgttgaagatgaagatgttgagatgattttcaggtctgtcacaagttgtagaagt
tataatggtataactgtagaaaacaggaagaagctgcaagcacttggacgcattatatct
gtttcagcaaaagtctccagttcttcctgtagtaggattttccaaagtttctttatccgt
ttgatggacatccttggagtttcctcagatggaagtggttttctttctgaaaaactgaat
tctggggctctttacctttgcattgaacttcttgctgcatgcaaggatttggttttagac
tctggagaacctgctccagaatctttttcattggaagacacttggtgcaacttgcttcaa
aaattttctgctccactgactgatgctttcagttctattttggtatcaagtatggaacaa
ggtttctctgaagatatttataccggagtgaagggtttgcagtctctggcaacatttcct
ggattcttgccaatattaaaaccagtatatgagaatatcttggcaatctttatgtcaatt
ataacttctggttgtgaaattacattgttatggaagctgagtttgaaggcattagtgcag
attggtatctttattgagaaatatcatgattccgagaaggcattgagctacatgaacatt
gtcgttgaaaagtttattaagttgattcacaatgatgattctgttatgtctcttcaactg
aagctggaggcagctactgacattggtagtacggggaaggatgttatgctcagaatagct
caggggatggaagaagctatatctaccagtttctatgaggcttgtgtcaaaggaaatttg
aagtcagttgagattttagtacctgtgctggagtgttactccactaaggtgcttccttgg
ttccataaaactggggagtttgagaaagttgtgttgaactttgcaatcaatatttggatt
cagatagaaagtattatgactttcaacatttgctttcgagaaaaagagttgcttgatgca
acagtgatggcaatgaatctggctgttggaatttgttcggaggaaaatcagtccatgata
gttcaaaaggcatatgatgtactttcattagcgacttttcttccactgaatgagtcagtc
cctctctcagctcctgtaaaactagaagggttacaatgttcccaagatttctgtagtttt
tcaagtacagatgagtggcttatttcattatttgcatcagtaattatggcagttcgccct
caaacagaaattccaaatgtaagatttatattgaagctgttcatgtttgctcttttgaga
ggacaagttccagcagctcaggcattgggttctatgattaacaaattgcctgtaaaatta
aactcaacagaaggctcgagtacctgcactttggaagaggcaatggatataatcttcgag
gcaaatttatggagtttgtctggtaatgtccctttaagaaaatgcagtactatggataga
aataaggtggccattgctactttatttctcaacagtcatgagaatgtgaatgttcaaacc
caagctattgttggattggcatggatagggaaaggtttacttatgcgaggccatgaaaaa
gtgaaagagatcacaatgcttttcttaggatgcttgctgtcaagtggtgaaattgggatc
ttgcctttgcagcaagattctttgggagattttaatggccaggatatagatcctgtcgtg
atgagatcagcagctgatgcattccatgtccttctaggtgattctgaagtttgtctaaat
aaaaggtgtcatgcaagcatacgacctctttataggcaacattttttttctatcatgatg
cccattcttctcttttcaatagctgaatctgattcttcaacttccagacgtatgctctat
cgagcttttgcgcatttcatttctggtactccagtcgttgctgttgtagctgaagcgaag
aagcttattgctgtcatattggatgccttgtccatgttgagtatggatgttctggataaa
gatctggtctatagcctcttactgaccctatctgcaatcttaacagatgaaaatgaacga
gatactgtttcagagaatgctcatataatcgtagattgcctcattggactggcctcctac
tcccacatgatgcttgttcgagagacagcaattcaatgtcttgttgctttatcagggctc
ccctatgtgaggatttatcctatgagaacaaaggtgttacgagcgattttaaaggctctt
gatgatccgaagaggatagttcgcgaagaagccgttcgatgtcgtcaagcttgggcgtca
attgcttctaggagtattcatttctaa

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