Telopea speciosissima (New South Wales waratah): 122646408
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Entry
122646408 CDS
T07910
Name
(RefSeq) cellulose synthase-like protein D5
KO
K00770
1,4-beta-D-xylan synthase [EC:
2.4.2.24
]
Organism
tss
Telopea speciosissima (New South Wales waratah)
Pathway
tss00520
Amino sugar and nucleotide sugar metabolism
tss01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
122646408
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
tss01003
]
122646408
Enzymes [BR:
tss01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.24 1,4-beta-D-xylan synthase
122646408
Glycosyltransferases [BR:
tss01003
]
Polysaccharide
Structural polysaccharide
122646408
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cellulose_synt
zf-RING_4
Glyco_tranf_2_3
S6OS1
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
122646408
NCBI-ProteinID:
XP_043695891
LinkDB
All DBs
Position
11:complement(47073503..47077489)
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AA seq
1166 aa
AA seq
DB search
MVQKVSSPSSPVTITVSSSGGKGGGFRGVGLTSPVPRFSLSNNQNSPLSSRGNRASSSER
RASTGGNGKYCSISKDDAKQVSSEFVNYTVHIPTTPEHQPMSSSLSSLPDEDAKDPGKPN
RSYISGTIFTGGFNSVTRGHVTECSSDLPEMVKSMAMICGMNGCDGEALQGDGRVPCDCG
YKICRDCYLDCIGNGDNCPGCKEPYMDVPDDYDEARSETYDQARPLPSMMDGRLSLVKSF
KAHNHPSEFDHNCWLYETKGTYGYGNAVWPKDGYGGGSGVNGFEHPPNFGERSRRPLTRK
VSVSTAILSPYRLLMAIRLVALGFFLTWRIRHPNHEAMWLWGMSVTCELWFALSWLLDQL
PKLCPVNRVTDLSVLKDRFESPSLRNPKGRSDLPGIDVFVSTADPEKEPPLVTANTILSI
LAVDYPVEKLACYLSDDGGSLLTFEALAETASFARIWVPFCRKHGIEPRNPEAYFGQKRD
FLKNKIRVDFVRERRWMKREYDEFKVRINSLPDSIRKRSEAYNSNEELKAKRKQMEMGGN
PSEPLKVPKATWMSDGVHWPGTWSSAGNDHSRGDHAGIIQAMLAPPNSEPVMGAEADEEN
PCDTTEVDIRLPMLVYVSREKRPGYDHNKKAGAMNALVRTSAIMSNGPFILNLDCDHYIY
NSLALREGMCFMLDRGGDRICFVQFPQRFEGIDPNDRYANHNTVFFDVSMRALDGLQGPM
YVGTGCIFRRIALYGVSPPRATEHHGWFGRRKMKLSLRRPGKVAKKKTDEMVLPINGEHN
DEDDDGDIESLLLPMRFGNSTTLVASIPVAEYQGRLLQDLQGKGSQCRPAGSLAVPREPL
DTASVAEAISVISCFYEDKTEWGSRVGWIYGSVTEDVVTGYRMHNRGWRSVYCVTKRDAF
RGTAPINLTDRLHQVLRWATGSVEIFFSRNNALFASRRMKFLQKVAYFNVGIYPFTSFFL
LVYCFLPAMSLFTGQFIVESLNVTFLTYLLVITVTLCLLAILEIRWSGITLHDWWRNEQF
WLIGGTSAHPAAVLQGLLKLIAGVDTSFTLTSKSSTPDDGDDEFAELYIVKWSFLMVLPI
TIMMVNIVAIAVGVARTMYSPFPQWSKLLGGVFFSFWVLCHLYPFAKGLMGKRGKVPTIV
FVWSGLLSLIISLLWVYISPPSGRQV
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
atggttcagaaggtttcttccccttcctctcctgtgaccattacagtttcttcttcagga
ggtaagggaggaggttttagaggcgtgggcttgacaagcccagtcccacgtttttcactc
tcaaacaatcagaattcccctctcagtagcagaggaaacagagcttcaagtagcgaaagg
cgagcttcaactggtggaaatggaaaatattgctccatctctaaagacgatgccaaacaa
gtgagctcagagtttgtgaactatactgttcacatcccaacaaccccagaacaccagccc
atgagctcatctctaagttccctccctgatgaagatgctaaagacccaggaaaacccaat
aggagttacatctcaggtaccatcttcactggcggtttcaactcggtgactcgtgggcat
gttacagagtgctcatctgaccttcctgaaatggtgaaatccatggcaatgatatgcggc
atgaatggttgtgacggtgaagcgttgcaaggtgatgggagagttccatgcgattgtggt
tacaaaatttgcagggactgttatctggattgcattggaaatggagacaattgccccgga
tgtaaggagccgtacatggatgtgcctgacgattatgatgaagccagatctgaaacatac
gatcaggctcgtccactaccctcaatgatggatgggaggctttcgcttgtgaaatcattc
aaagcccacaatcatccttcggaatttgatcataactgctggctttatgaaacaaagggg
acatatgggtatggaaatgcagtctggcccaaagatggatatggtggaggatctggggtt
aatgggttcgaacatccacctaattttggagaaagaagcaggaggcctctgacccggaag
gtgtcggtttctactgcaattctcagtccatacaggttgcttatggcgattcgtcttgtt
gcacttggtttctttcttacttggagaattagacatcccaaccatgaggcaatgtggtta
tgggggatgtcagttacttgtgaactctggtttgccttgtcatggcttctagaccagctc
cccaagctctgccctgtgaacagagttactgatctctctgttttgaaagaccgttttgaa
tccccgagccttcggaatcccaaaggaagatctgatcttccagggattgatgtttttgta
tccacagcagatccagaaaaagaacctcctcttgtaactgcaaacaccattctctcaatc
cttgctgttgattatcccgtggaaaagcttgcttgttatctatcagatgatggaggatca
ctcctgacatttgaagctcttgcagagactgcgagctttgcaaggatatgggttcctttc
tgcaggaaacatggaatagaaccaagaaatcctgaggcatactttgggcagaaacgtgac
ttcctcaagaacaaaatccgggtagattttgtcagggaaagaagatggatgaagagagaa
tatgatgagttcaaggtgaggataaactccctacctgactcaataaggaagaggtctgaa
gcatataattccaatgaagagctaaaagcaaagagaaaacagatggaaatggggggcaat
ccctctgaaccgctcaaggtcccaaaggctacatggatgtctgatggggttcattggccg
gggacatggtcatctgcagggaatgaccattcaagaggggatcatgcgggtataattcag
gcaatgctagctccaccaaattcggaaccagtaatgggtgccgaagcagatgaggagaat
ccatgtgataccactgaagtggatatcagattgccgatgctggtatatgtgtctcgagag
aaaagaccaggctatgatcacaacaagaaagcaggggccatgaatgctctggttcgaacg
agtgcaatcatgtcaaatggcccatttatactcaaccttgactgtgaccactacatatac
aattccttagccctcagggaagggatgtgcttcatgcttgacaggggtggcgacagaatt
tgctttgtccaattcccacagaggtttgaaggtattgatccaaatgaccgttatgcaaac
cacaatactgtgttcttcgacgtgagcatgagggcactggatgggttgcagggtccaatg
tatgtggggactggttgcattttccgtagaattgctctttatggcgttagtcctccaagg
gcaacagaacatcatgggtggttcggaagaaggaaaatgaagctatcccttagaagacca
ggcaaagtggcaaagaagaaaacagatgagatggttttgccaatcaatggtgaacacaat
gacgaagatgatgatggagatattgaatctctgcttcttccaatgaggtttggaaactct
acaactcttgtagcttcaatccctgtagcagaatatcaaggaaggttgcttcaagatttg
caaggaaaaggtagtcaatgcaggcctgctggttctcttgcagtacctcgagagccctta
gacactgcgtcagtggcagaggcaattagtgtgatatcctgcttctacgaggacaaaaca
gagtggggaagtagggtgggttggatttatggttctgtaacagaagatgttgttacaggt
taccgtatgcacaacaggggatggagatcagtgtactgcgtcaccaagcgtgatgcattc
agagggacggcacctatcaatctgactgacaggctccaccaagtactccgatgggctact
ggctctgttgagatcttcttctcccgaaacaatgctctctttgcttcccgacggatgaaa
ttcttgcagaaggtggcctacttcaacgttgggatataccccttcacgtcattcttcctt
cttgtatactgctttctgccagcaatgtccctcttcacagggcagttcatagtagagtcc
ctcaatgtgacctttcttacatatttgttggtgatcacagtcaccttatgcttgcttgcc
atccttgagataaggtggtctgggatcactcttcatgactggtggcggaacgaacaattt
tggttgattggtggaaccagcgctcacccagctgcagtgttacaaggcctactaaagtta
attgcaggagttgatacatcattcacattgacatccaaatcttcgacacctgatgatgga
gatgatgagtttgcagagctatatatagtgaagtggagcttcctgatggtcttaccaatc
acaattatgatggtgaacatagtagctattgcagtcggggtggcaaggaccatgtacagc
ccatttccacagtggagcaagctcctaggtggggtattcttcagcttttgggtcctgtgc
catctctatccatttgccaagggcttgatggggaaaagagggaaagtccccacaatagta
tttgtatggtctggattgctatcactcattatttctttgctttgggtgtacataagccct
ccttctgggaggcaagtatga
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