Telopea speciosissima (New South Wales waratah): 122646424
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Entry
122646424 CDS
T07910
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 20, chloroplastic
KO
K05391
cyclic nucleotide gated channel, plant
Organism
tss
Telopea speciosissima (New South Wales waratah)
Pathway
tss04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
122646424
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tss04040
]
122646424
Ion channels [BR:
tss04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
122646424
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Motif
Other DBs
NCBI-GeneID:
122646424
NCBI-ProteinID:
XP_043695912
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Position
11:47968897..48047913
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AA seq
773 aa
AA seq
DB search
MDGGKKDELLIRDANSQPLDIKFRRFQGMNRSASMSIQMNSMESYESEKNLVSHTGPLQS
NRGTSSIQMSGPLFIRRGPGNFTQPMDGIVGQKSPSLMEDQLPPSNEMEEKDWSNTDFTR
NIGHLLNSGPLGACNDPYCTTCLSYYNFKADEQKKSRDSRPFDPKLHKAFYGDGWARKIF
NFLHPFIPGVMNPHAKVVQQWNKFFVIACLLAIFVDPLFFFLLTVQEDNKCIVLNVPLTT
TLVVFRTVTDFIYFIHMLIQFRLAYVAPESRVVGAGDFVVHPKKIALHYLRGYFLIDLFV
VLPLPQIMILVVLPIYVGSSAANYAKNLLRATLLLQYIPKLYRFLPLLGGQSSTGFIFES
AWGNFVINLLMFVLAGHVVGSCWYLLGLQRVNKCLQDACNDSQQKSCSEFIDCGHGEKIT
NFMSKPEWLSWVNNQNATACFDTSSSGSFSYGIYNQAVSLTTQPSIITRYVYSLFWGFLQ
ISTLAGNQVPSYFVWEVLFTMGIIGLGLLLFALLIGNMQNFLQALGKRRLDMQLRRRDVE
QWMRHRRLPEELRRKVRASERFNWSVTRGVDEEMLMEDLPEDLQREIRRHLLKFIKKVRI
FSLIEDPILDAIRERIRQNIYIQGSKILNIGEPVEKMVFIVRGKMVSSGEDCNRIPLSEG
DVCGEELLTWCLEHSSMSKDGQRMSIPGQRLLSNRTVKCLTNVEAFSLRAADLEEVTSRF
ARFLRNPRVQRAIRYESPYWRTLAAMHIQVAWRYRKKRLNRVNTFTQELQSMS
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atggatggtggtaagaaagatgaattgctcataagagatgctaattctcaacctctagat
attaaatttcggaggtttcaaggcatgaatcgtagtgcatcgatgtccatacaaatgaac
tcaatggagtcatatgaaagtgaaaagaaccttgtaagtcatactggtcctttgcagagc
aatagaggaacttcctccatacaaatgagtggcccattatttattaggaggggccctgga
aattttactcagcctatggatgggatagtgggccagaagtcaccttctctaatggaagac
caattacccccttctaatgagatggaagaaaaagactggtcaaacactgacttcaccaga
aatatcggacatttattaaattctggaccattgggtgcatgcaatgatccttactgcaca
acttgcctatcatattataatttcaaagcagatgagcaaaagaaatcaagagattcgcgt
ccatttgatcccaagttgcataaagctttctacggggatggttgggcgaggaagattttc
aactttctacatccattcattcctggtgtcatgaatcctcatgctaaagttgttcaacaa
tggaataaattttttgttattgcatgcttgctggcgatttttgtagatcctttgttcttc
ttcctgcttactgttcaagaggataataagtgcatagttcttaatgtgcccttgacaaca
acactagtggtttttagaacagttactgatttcatttatttcatacacatgcttattcag
tttaggttggcttatgttgctccggagtcaagagtggtgggtgctggagattttgttgtc
catccaaagaaaattgctctccattaccttcgtggttattttttaatcgatctattcgta
gtattaccactacctcagatcatgatattggtggtcttacccatatatgttggatcatca
gctgcaaattatgcaaagaatcttttgcgggcaacccttcttcttcagtacatacccaaa
ctttacaggttcctgcctttgcttggtggtcagtcttcaacaggcttcatatttgaatca
gcatggggcaactttgttattaatcttctcatgtttgttttggctgggcatgttgttggc
tcatgctggtacctcttgggtttgcagagggtgaacaaatgccttcaagatgcctgcaat
gattctcagcagaagtcctgcagcgaattcattgattgcggacatggggagaaaattaca
aattttatgagcaaacctgaatggcttagttgggtgaacaatcaaaatgcaactgcctgt
tttgacactagtagtagtggttccttcagttatgggatttacaaccaagctgtttctcta
accacacaaccaagcatcattacgagatatgtgtactctttgttttggggtttcctgcaa
atcagtactttggctggaaatcaagttcctagttattttgtatgggaagttcttttcaca
atgggcatcattggacttgggctcttgctgtttgctttactcattggaaatatgcagaac
tttctccaagctcttggaaagaggcgattagatatgcaactacggcgtcgtgatgttgag
caatggatgaggcatcggcgcttgcccgaagaactaagaaggaaagtaagagcatcagaa
aggtttaactggtctgttacacgaggcgtagatgaagaaatgctaatggaagatttaccg
gaggacctccagagagaaatccgtcgtcatcttcttaaatttatcaagaaagtccgcatt
ttttccctaattgaggatccaatcttagatgccatccgtgagagaataaggcaaaacatt
tacatacaaggaagcaaaattttaaacattggagaaccagttgagaagatggtctttatt
gtacggggtaaaatggtgagcagtggagaagattgtaatagaattccattgtcagaaggg
gatgtttgtggtgaagagctactcacatggtgccttgagcactcttcaatgagcaaagat
gggcaaagaatgagtatacctggccagagattgctatccaacaggacggtcaaatgttta
actaatgtggaagcattctcactccgagctgctgatttagaagaagtcacctctcgtttt
gcaagatttttgcggaatccacgtgttcaaagggccataaggtacgaatcaccgtattgg
agaacacttgcagcaatgcatatccaagtagcttggagatacagaaaaaaacgattaaat
cgagtgaatacctttactcaggagcttcagtcaatgagctaa
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