KEGG   Telopea speciosissima (New South Wales waratah): 122646435
Entry
122646435         CDS       T07910                                 
Name
(RefSeq) splicing factor 3B subunit 4
  KO
K12831  splicing factor 3B subunit 4
Organism
tss  Telopea speciosissima (New South Wales waratah)
Pathway
tss03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tss00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    122646435
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:tss03041]
    122646435
Spliceosome [BR:tss03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    122646435
 Complex B
    122646435
 Complex C
   U2 SnRNP specific factors
    122646435
SSDB
Motif
Pfam: RRM_1 RRM_7 OB_RNB RRM_5
Other DBs
NCBI-GeneID: 122646435
NCBI-ProteinID: XP_043695920
LinkDB
Position
11:12313326..12340122
AA seq 373 aa
MTTRIAPGVGANLLGQHSAERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDR
VTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFVGNLD
PDVDEKLLYDTFSAFGLIVTNPKIMRDPETGNSRGFGFISYDSFESSDAAIEAMNGQYLC
NRQITVSYAYKKDTKGERHGTPAERVLAASNPGAQKNRPHTLFASGPPTLSNGPQANGTM
GVPVPPRPFANGPINPGQVPAIRPPPPQVGAFPPPMQLAGQHWPGQMQQQGQMMMPPVMP
PPPQQFRPLARPPPPNIPPPPQAAVSRLPPPPMGMNAPPLVWPPAPPPQHHMAGRPPPPP
PMSMPPPPPPPSA
NT seq 1122 nt   +upstreamnt  +downstreamnt
atgacgactcgaatcgctccgggcgttggagcgaacctcctgggccaacactcggccgag
aggaatcaagacgccactgcttatgttggcaacctcgacccccaggtcagtgaggaatta
ctatgggagttgtttgttcaagcaggccctgttgtcaatgtttatgtgccaaaggataga
gtgacaaatcttcatcaaggatatgggtttgtggagttccggagtgaagaagatgcggac
tatgcaataaaggttctgaacatgattaaactgtatgggaagccaatacgtgtgaataag
gcttctcaagataagaagagcttggatgttggtgcaaacctttttgttggaaaccttgac
cctgatgtggatgaaaagcttctctatgatacttttagtgcatttggactcattgttaca
aacccgaagataatgagagaccctgagactgggaattcccgtggttttggttttattagc
tatgattcttttgagtcttctgatgcagctatcgaggccatgaatggtcaatatctctgc
aatcgtcaaattacagtgtcctatgcatacaagaaagataccaaaggggagcgtcatggt
accccagcagagagagtcttggctgcaagcaatcctggtgcgcagaaaaacaggccccac
acgctttttgcaagtggaccacctacactatcgaatggtcctcaggctaatggtaccatg
ggggtccctgttcctcctcgtccctttgcaaatggtcccattaatcctgggcaagttcca
gcaatccgccctcccccgccacaggttggggcctttccccctcctatgcaactagcaggg
cagcattggcctggtcagatgcagcaacagggtcaaatgatgatgccacctgtcatgcca
cctccacctcagcagttcagaccacttgccagaccaccaccacctaatattccacctcct
ccacaggcagcagtttcaaggcttccaccaccaccaatgggtatgaatgcaccaccactg
gtttggccaccagcaccacctcctcagcatcatatggctggaagacctcctccgccacct
ccaatgtccatgccaccacctccaccacctccatcagcttga

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