Telopea speciosissima (New South Wales waratah): 122646437
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Entry
122646437 CDS
T07910
Name
(RefSeq) ubiquitin receptor RAD23b isoform X1
KO
K10839
UV excision repair protein RAD23
Organism
tss
Telopea speciosissima (New South Wales waratah)
Pathway
tss03420
Nucleotide excision repair
tss04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
122646437
09124 Replication and repair
03420 Nucleotide excision repair
122646437
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
tss03051
]
122646437
03400 DNA repair and recombination proteins [BR:
tss03400
]
122646437
Proteasome [BR:
tss03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
122646437
DNA repair and recombination proteins [BR:
tss03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
122646437
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
UBA_7
CUE
Rad60-SLD
TECR_N
UBA_3
UBA_Ucp12
Ubiquitin_2
UBA_RAD5A
MUCL1
Rad60-SLD_2
Motif
Other DBs
NCBI-GeneID:
122646437
NCBI-ProteinID:
XP_043695924
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Position
11:7682502..7696713
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AA seq
384 aa
AA seq
DB search
MKLTVKTLKGSHFEIRVQPSDTIMAVKKNIEDVQGKDSYPCGQQLLIHNGKVLKDETTLE
ENKVSEDGFLVVMLSKSKTMGSTGGSSVQGSSTAAAPSPTTAAAPAPTTAATPAPTTAAT
PAPTAAADATPEAPVTSGDVYGQAASNLVAGSSLEQTIQQIMDMGGGNWDKETVTRALRA
AYNNPERAVDYLYSGIPETAEIAVPVAPLPSNPASGGANPTSQTSAASTAAVTGGPNSSP
LNLFPQEALNSAAAGGGSLDFLRHNQQFQALRSMVQSNPQILQPMLQELSKQNPQLLRLI
QDHHAEFLQLINEPVEGAEGDLFEPAEQDMPHAISVTPAEQEAIERLEAMGFDRALVIEA
FLACDRNEELAVNYLLENAGDYED
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgactgtgaagacgctgaaaggcagtcactttgaaatccgcgttcagccaagc
gacacgattatggctgtaaagaaaaatattgaagatgtgcaaggaaaggacagctatcca
tgtgggcagcaattattgatacataatggaaaggtgttgaaagatgaaactaccctggaa
gaaaacaaagtcagtgaagatggttttcttgttgttatgcttagcaagagcaaaaccatg
ggatcaacagggggctcatctgtgcagggttcttcaactgcagcagcaccttcaccaaca
actgcagcagcacctgcaccaacaactgcagcaactcctgcaccaacaactgcagcaact
cctgctcccactgctgcagctgatgctactccagaagcaccggttactagtggtgatgtc
tatggtcaagctgcttccaatttagttgctggtagtagtcttgagcagactattcaacaa
ataatggatatgggtggtggtaactgggataaggagactgttacacgtgctcttcgtgca
gcgtacaacaatcccgagcgtgctgttgattatttatattctggtattccagaaactgca
gagattgctgttcctgtagctcctctcccttcaaatccagcatctgggggggccaacccc
actagtcaaacaagtgcagcaagtactgcagcagtcactggagggcctaattcttctcct
ctgaatttgtttccacaggaggctctcaattctgctgctgctgggggtggatcccttgat
ttcctgagacacaaccagcagttccaagcattgcgttcaatggtgcaatcaaatccacaa
attctacagccaatgcttcaggagctgagcaagcaaaacccccaacttcttagactgatc
caggatcaccatgcagagtttcttcaattaataaatgaaccggttgaaggtgctgaaggg
gatctatttgagccagctgagcaagatatgccccatgctattagtgttacacccgcagag
caggaggctattgaacgacttgaagctatgggctttgacagagcccttgtcatcgaggca
tttttagcttgtgaccgtaatgaggaattggctgtcaactatttgctagagaatgctggg
gattatgaagattaa
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