Telopea speciosissima (New South Wales waratah): 122646492
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Entry
122646492 CDS
T07910
Name
(RefSeq) DNA (cytosine-5)-methyltransferase CMT2-like isoform X1
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
tss
Telopea speciosissima (New South Wales waratah)
Pathway
tss00270
Cysteine and methionine metabolism
tss01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
122646492
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tss03000
]
122646492
03032 DNA replication proteins [BR:
tss03032
]
122646492
03036 Chromosome and associated proteins [BR:
tss03036
]
122646492
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
tss02048
]
122646492
Enzymes [BR:
tss01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
122646492
Transcription factors [BR:
tss03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
122646492
DNA replication proteins [BR:
tss03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
122646492
Chromosome and associated proteins [BR:
tss03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
122646492
Prokaryotic defense system [BR:
tss02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
122646492
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
BAH
Chromo
Motif
Other DBs
NCBI-GeneID:
122646492
NCBI-ProteinID:
XP_043695994
LinkDB
All DBs
Position
11:complement(16948912..17068175)
Genome browser
AA seq
1145 aa
AA seq
DB search
MHMAPMIIDLTVPDERCMQRYIRRCSALRLTVSDEKRALKKKNSTMSEGRWLRRSTRLSS
SSACVANPMHSEKHASKKRKTSVSIVDSETLEGRREERRVRRSLRINSALEGTGNSACKA
HAMKLAGSDEEYSKEETEVLIFDLETSEERCLRRSPRISSAPEGTGNSGSKVQLDNLARS
AEKQPPKKPEISVPIIDLTLLDDIWLRRSPRLSSGLLRTGYSGGCKANSKQLAASEEKQL
VKKRNTSVVIIDLETMEGHCLRQSPRKSSPPLGTGKSGRKFNSVQFPGLAEKQPAKKQKV
SVTSFGLAMSEEGWRRCSPRTSSAPAGTENSAHKANSAKLAGRAYKWHSKKQKCYVSKKI
KGNNCFFIGEPIPFEEACKRWPWRYEGKGKGSKGQKASDNDEDEMFLNVQCHYAQAEILK
CVFEIGDFAYVKGKEGGPNYVGKILEFFKTVDGEDYFRVQWFFRAEDTVMKDQAEFHDKK
RLFFSDLMNDNILNCIVSKVKIIQVAPSVELKSKYIPPCDFYYDMKYSVDYSTFSTTVDD
NPKVNSNISSSSSTDAVHMNTSGTCLEVRSSHGYKKSKLTLLDLYSGCGGMSTGLCLGAK
LSGVNLVTKWAVDLNESACESLRLNHPNSQIRNESAKDFLDLLKEWEKLCKRYIGDLRNT
YRVPNSDEGKVNPEDKISTGEYEVLRLVDICYGDPSKTGKRGLKFKVRWKGYGPSDDTWE
PIEELSKCQDGIRDFVREGFKLKILPLPGDADVVCGGPPCQGISGYNRFRNVDAPLEDER
NLQIVFFMDIVKFLKPKFVLMENVVDILRFADGSLGRYALSRLVHLNYQARLGIMAAGCY
GLPQFRLRAFLWGAHPCEKLPQYPLPTHDVILRYGTPYEFERNTVAYDEGQPRKLERALR
LRDAISDLPAVTNHETREEMPHQMRPETEFQKFIRSTKYEMMGSLLNGEITKKSVLNDHR
PLPLNEDDYLRVCQIPKRKGANFRDLPGVIVGADNVVRLDPKMERVLLPSGKPLAPDYAL
NLSQGKSTRPFARLWWDETVPTVLTTPEPHNKVSLHPEQDRVLTIREYARLQGFPDYYRF
CGTLKKRYCQIGNAVAVPVARALGYALGMASLKLTGDEPLMTLPPKFSHSTALQLVQSSS
PVVEE
NT seq
3438 nt
NT seq
+upstream
nt +downstream
nt
atgcacatggctccaatgataatagatttaacagtgccggacgaaagatgcatgcaacgg
tatattaggagatgctcggctctgcgattgactgtttcggatgagaaacgggccttgaaa
aagaaaaattcgacaatgtcggagggaagatggctgagacggtctacaagattatcgtct
tcaagtgcatgtgtggctaatccaatgcattcggagaaacatgcttcaaagaagcgaaaa
acttcggtttcgattgttgattcggaaacgttggagggaagacgcgaggaaagacgagtg
agacggtctctgaggattaactctgctctggaagggactgggaatagtgcttgtaaggct
catgcaatgaaattggctggttcggatgaggagtattcaaaggaggaaactgaagttttg
atttttgatctggaaacgtcagaggagagatgcctgagacggtctccgaggatatcttca
gctccagaggggactgggaacagtggaagtaaggtccaattggataatttagctcgttcg
gctgagaaacagcctcctaagaagccggaaatctcggttccgattattgatttgacgtta
ttggatgatatatggctgagacggtccccgaggctatcttcaggtctgttgcggactggg
tacagtggtggctgtaaggctaattcaaagcaattggcagcttcagaggagaaacagctg
gtgaagaagcggaatacgtcagtcgtaattattgatttggaaaccatggagggacattgc
ctgagacagtctccaagaaagtcctcacctccgcttgggactgggaaaagtggacgtaag
tttaactcagtacaattccctggtttggctgagaaacagcctgcaaagaagcagaaagtt
tcagttacaagttttggtttggcaatgtcggaggaaggatggcggagatgttctccgagg
acatcctcagctccggcagggacagagaacagtgcccataaggctaattcagcgaagttg
gctggtcgagcctataagtggcattcaaagaaacagaaatgctatgtttcaaagaagatt
aaagggaacaactgtttctttattggagaacctatcccttttgaggaagcttgcaaaaga
tggccttggcgctatgaaggaaagggtaaagggagtaagggtcaaaaagcatctgacaat
gatgaagatgaaatgtttttaaatgtgcaatgtcattatgctcaagctgaaattctgaaa
tgtgttttcgaaattggagattttgcgtatgtgaagggaaaagaagggggaccaaattac
gtgggaaagatcttagagttttttaagacagtggatggagaagattactttagggttcaa
tggttctttcgagctgaggatacggttatgaaagaccaagctgaattccacgacaagaaa
cgcctatttttctctgatctcatgaacgataacatattaaattgcattgtttcaaaagtc
aagatcatacaagtagctcctagtgtagagttaaaatcaaaatatattccaccatgtgac
ttttactatgatatgaaatattctgtggactattcaacattttctaccactgtggatgac
aacccaaaagtgaacagcaacatatcctcatccagttccactgatgcagtccatatgaac
actagtgggacctgtttggaggtaagatctagccatggatacaaaaagtcaaagctaaca
ctgttagatctttattctggttgtgggggaatgtcaactggattgtgtcttggtgccaaa
ctctctggtgtaaatcttgttacgaaatgggctgttgatttgaatgaatctgcttgcgaa
agcttgcgcctaaatcatcctaattcacaaattaggaatgaatctgcaaaggattttctt
gacctattgaaggaatgggaaaaactttgcaaacggtatatcggggatttaagaaatacg
tacagagttccaaactcagatgagggaaaagtaaatccagaggacaagatttcaactggt
gaatatgaagttttgaggctggtagatatttgctacggtgatcccagtaaaacagggaaa
cgcgggttgaaatttaaggtgcgttggaaaggttatggtcctagcgatgatacatgggaa
ccaattgaagagctgagtaaatgccaagatggaataagggattttgtgagagaaggattt
aagttaaaaatattgccacttccgggagatgctgatgttgtttgtggggggcctccatgc
caagggattagtggctataaccgatttagaaatgttgatgccccacttgaagatgaaaga
aatcttcaaatagtatttttcatggatatagtgaagtttttaaagcccaagtttgtttta
atggagaatgtggttgacattttgaggtttgctgatggttctcttggaagatatgcttta
agtcgtttggttcatttgaattaccaagctaggcttggaatcatggctgccggttgttat
ggtcttccacaatttcgattgcgtgctttcttgtggggtgcccatccctgtgagaaacta
cctcaatatccacttccaacacacgatgtaattcttagatatggtactccatatgaattt
gagcgcaacactgttgcttatgatgaaggccagccccgcaaactagaaagagcacttcgt
cttcgtgatgctatctctgatctcccagctgtgacaaatcatgaaactcgtgaggagatg
ccacaccaaatgcgtccagaaactgagtttcaaaaatttataagatcaactaaatatgag
atgatgggttccttgttgaatggagaaataactaaaaaatctgtactgaatgatcatcgg
cctcttccgttaaatgaggatgattatttgcgtgtctgtcaaatcccaaagagaaaggga
gcaaactttagggacctccctggtgtaattgttggagctgacaatgttgttcggttggat
ccaaaaatggaacgagtgctcctaccatctggaaaaccactggctccagattatgctcta
aatttatcccaaggaaagtctactagaccttttgcacgactatggtgggatgagacagtg
ccaactgtattgactaccccagagcctcacaacaaggtatctttacatcctgagcaagat
cgagtcctcactatacgggaatatgcaagattgcaggggtttcctgattattacaggttt
tgtgggacactaaaaaagagatattgtcagattggaaatgcagtggctgttcctgttgca
agagctcttggatatgcactggggatggcatcactgaagctgactggggatgaaccactc
atgaccctcccgcccaagttttcccattctactgcccttcaattggtacagtcctcatct
ccggtggtagaagaataa
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