Telopea speciosissima (New South Wales waratah): 122646662
Help
Entry
122646662 CDS
T07910
Name
(RefSeq) exosome complex component RRP42 isoform X1
KO
K12589
exosome complex component RRP42
Organism
tss
Telopea speciosissima (New South Wales waratah)
Pathway
tss03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
122646662
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tss03019
]
122646662
Messenger RNA biogenesis [BR:
tss03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
122646662
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
122646662
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
122646662
NCBI-ProteinID:
XP_043696185
LinkDB
All DBs
Position
11:complement(46524544..46527513)
Genome browser
AA seq
286 aa
AA seq
DB search
MVGLSVGEKHFIQGGIAQDLRTDGRKRLTYRPISVETGVIPQANGSARIRMGTTDVIASV
KAELGKPDLFQPDKGRVIINVDCSPTAAPVFEGRGGEELSTELSVALQRCLLGSKSGTGA
GIDRSSLLVVEGKLCWDLYIDGLVVSSDGNLLDALGAAIKAALSNTGIPKVNVATAASAD
EQPEVDISDEEFLQFDTSGIPVIVTLTKVGRHYIVDATSEEESQMSSAVSVSVNRNGHIC
GLTKRGGAGLDPSVILDMISVSKHVSEQLMNKLDSEISAAEADEAE
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atggtgggactatctgttggagagaaacattttatacagggtggtattgctcaagacctt
cgcactgatggtcgaaaaagattaacttaccgacctatatctgttgaaactggagtcatt
cctcaggctaatggttctgcaagaattagaatgggtaccactgatgtcattgccagtgtg
aaggctgaacttggaaaaccagatctgtttcaacctgacaaaggcagggtcatcataaat
gttgattgtagtcccacggcagcccctgtatttgagggcagaggaggtgaagagttgtct
acggaactctcagttgcactgcagagatgcttattgggtagtaaaagtggaacaggggct
ggcatcgaccgttcatctctattggttgtggaagggaaactatgttgggacctttacatt
gatggccttgttgtcagttctgatgggaatttactggatgccttaggtgctgcaatcaag
gctgccttgagcaatacaggcatcccaaaagtaaatgttgcaacagctgcctctgccgat
gagcagccagaagttgacataagtgatgaagagtttttacagttcgacacctctggcatc
ccagtaattgtaactttaaccaaggttggtagacactacattgtagatgcaacctcggaa
gaggaatcccagatgagctcagctgtctctgtttctgttaataggaatgggcatatatgc
gggctgaccaaacgagggggtgcaggcttagaccctagtgtaattcttgacatgatatcg
gtgtccaaacatgtgagtgagcagctaatgaacaagttggattctgagatttcagctgca
gaagctgatgaagctgaatga
DBGET
integrated database retrieval system
