Telopea speciosissima (New South Wales waratah): 122646668
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Entry
122646668 CDS
T07910
Name
(RefSeq) nijmegen breakage syndrome 1 protein isoform X1
KO
K10867
nibrin
Organism
tss
Telopea speciosissima (New South Wales waratah)
Pathway
tss03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
122646668
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tss03032
]
122646668
03400 DNA repair and recombination proteins [BR:
tss03400
]
122646668
DNA replication proteins [BR:
tss03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
122646668
DNA repair and recombination proteins [BR:
tss03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
122646668
BRCA1-C complex
122646668
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FHA
BRCT
Yop-YscD_cpl
Nbs1_C
PTCB-BRCT
Motif
Other DBs
NCBI-GeneID:
122646668
NCBI-ProteinID:
XP_043696190
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Position
11:44056551..44088383
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AA seq
538 aa
AA seq
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MVWGLFPAESLPGEQKYFIFSKGTYKVGRKGCEVIINSDKGVSRIHAELIVDAMTSFDPL
QQKSTGCPSQVSIRDCSKYGTFINKKLGSNAKVHEKPNKETTLKDGDLVVFGTGNATYRF
SYVRLVFFIYCSKPFQVNHSIEDKISSIGACPTYSWSTECTHVLVDESSPVKEDLIDAVL
ARKPVILSNWVEVVSEKSICTEIPICTPYAPTLSLEGVAVKVVDPKVRQNCLAGYTFILG
SLHMYKYGDRLKSLLDVGGAKALTVDEFCSSSQASEDGENNQVVLVIPEGSVNEFDRLHQ
VRSLSRVIDKNLVSAVLSGHLDPSIVVPPSIVISSSCSTDETIVPDSEVEVDTAASDCVA
EAVHAEAAIKPEVEEEISEYNKSEVKGEIPGGHAGAKSDHMPIPSFNYEDRGVITRRDKV
DESETFKNQFSDIVFSQDLIVKDTQMPASVYSITNNRVVNFKRFRKRETRSGNSFTDLIP
FSKDPYEESDYGGEDVVEYVKEEKKRKQMEAIAEDLFNSEKVKKRGTTGSLHGFLTRR
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atggtttggggactcttccccgctgaatccctcccaggtgaacagaagtattttatcttc
tcgaaagggacatataaagtgggtcgaaaaggttgtgaagtgattataaattcagacaag
ggagtctcccggattcatgctgaattaattgtggatgcaatgacttcctttgatcctctg
cagcaaaaatctacaggttgcccctcacaagtctccattagagattgctcaaagtatggc
acatttataaacaagaaactgggatcaaatgcaaaagttcatgagaaaccaaataaggag
actactctaaaagacggggacctggtggtattcggaactggtaatgctacctacaggttt
tcttatgttcgactggtatttttcatttactgctcaaagcccttccaagtgaatcattcc
attgaagacaaaatttcatcaataggtgcttgccctacttacagttggagcacagagtgt
acacatgtacttgttgatgagtcttccccagtcaaagaagatttaattgatgctgttctg
gctcgtaaacctgtcatcctcagtaactgggtggaggttgtttcagagaagagtatttgt
actgagattccaatctgcactccctatgctccaaccctgtcactggaaggggttgcagtc
aaagtcgtagaccctaaagtgcgacaaaattgtttggcaggatatacttttattttggga
tcactgcacatgtataaatatggtgataggttgaagtcattattggatgttggtggtgca
aaggcacttactgttgatgagttctgttcaagtagccaagcctccgaagatggagaaaat
aatcaagtggtgctagtaatccctgaaggatcagtaaatgagtttgaccgcttgcatcaa
gtccgttcactatccagagtaattgacaagaatttggtttctgctgttttatctgggcat
ctagatccatctattgtggtaccgccatctattgtcatctcttcttcatgctccactgat
gagaccatagtgccggattctgaggtggaagtggacacggcagcatctgattgtgtagct
gaagcagtccacgcagaagcagccataaaacctgaggtcgaagaggaaatatctgaatat
aacaaatcggaagtcaaaggagagatacctggagggcatgctggtgctaaatcagatcac
atgcctatcccaagcttcaattacgaggatagaggtgttatcacaagaagggacaaggtt
gatgaatcagagacatttaagaaccaattctctgatattgtattcagtcaagatttgatt
gtgaaagatactcagatgccagcttcagtttactctatcacaaataatagagtggtcaat
ttcaagcgcttcagaaagagagaaactcggtctgggaatagcttcactgatctaattcct
ttttcaaaagatccatacgaagaatctgactatgggggtgaagatgtagtggagtatgtg
aaagaagagaagaaaagaaagcaaatggaagctattgcagaagacttgtttaacagtgag
aaggttaagaaacgtggaacaactggttctcttcatggatttttaactcgtcgctga
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