Telopea speciosissima (New South Wales waratah): 122646809
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Entry
122646809 CDS
T07910
Name
(RefSeq) cell division cycle 20.1, cofactor of APC complex-like
KO
K03363
cell division cycle 20, cofactor of APC complex
Organism
tss
Telopea speciosissima (New South Wales waratah)
Pathway
tss04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
122646809
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tss04121
]
122646809
03036 Chromosome and associated proteins [BR:
tss03036
]
122646809
Ubiquitin system [BR:
tss04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Target recognizing subunit
122646809
Chromosome and associated proteins [BR:
tss03036
]
Eukaryotic type
Sister chromatid separation proteins
APC/C complex
122646809
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
WDR55
EIF3I
ANAPC4_WD40
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_HPS5
eIF2A
Beta-prop_WDR35_TULP_N
Ge1_WD40
Beta-prop_IFT122_1st
RMC1_N
Beta-prop_SPT8
WDR90_beta-prop_4th
Beta-prop_WDR11_1st
Beta-prop_VPS8
Motif
Other DBs
NCBI-GeneID:
122646809
NCBI-ProteinID:
XP_043696345
LinkDB
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Position
11:complement(19862138..19869380)
Genome browser
AA seq
442 aa
AA seq
DB search
MDAGKTPSWSPLRKKIVRKKNSHGNLDRFIPNRAAMDFDFARYMMTEGRKVKENPLASSP
SKGAYQKLLAEVFNMNRTRILAFKDKPPTPVELFPTEVYSSQQLKSVKPRRHIPQSSERT
LDAPDILDDYYLNLLDWGSSNILSIALGNTLYLWNASDGSSSDLVTIEDDYGPITSVRWA
PDGQHIAIGLHNSEVQLWDITAKRKLRTLHGGHRARVGALDWNNYILTTGAMDSRIINND
VRMRSQIVETYRGHTREVCGLKWSASGQQLASGANDNLLHIWDKAMASSTRWLHRFEDHT
AAVKALAWCPFQSNLLASGGGAGDRCIKFWNTRTGSCLNSVDTGSQVCCLLWNKNEQELL
SSHGFTDNQLTLWKYPSMVKMAELTGHTSRVLFMTQSPSGCTVASAAADETLRFWKVFGS
PEAGKPAPKTNSEPFANVSRIR
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atggatgcaggtaagaccccatcttggagcccacttcgaaaaaagattgttcggaagaaa
aattcccatggaaatttggatagattcataccgaatagagcagcaatggatttcgacttt
gctcgttatatgatgacagaagggaggaaggtgaaggaaaatcccctagcgagttctcca
tccaaaggggcttaccagaagctacttgcagaagttttcaacatgaacaggacgagaatt
ctagctttcaaagacaagccacccacccctgttgagctgtttcctactgaagtatattct
tctcaacaattgaaatctgtgaagcctcgaaggcacattcctcagagttctgagaggaca
ttagatgctcctgatattttagatgactactacttgaacttactggactggggtagtagc
aatatcctgtcaatcgcccttggaaacactttatatctatggaatgcttcagatggttct
tcttctgatcttgtgacaattgaggatgattatggtcccattacaagtgtccgctgggct
cctgatggtcagcacatagccattggcttacacaattctgaagtccagctttgggacatt
acagcgaagagaaagctgagaactcttcatggaggccaccgagcacgagtgggtgcactt
gactggaacaattatatcctgacaacaggagcaatggatagtcgcatcataaacaatgat
gtgaggatgaggtctcaaattgttgaaacctatagaggacacacccgagaggtctgcggg
ctaaaatggtcagcctcaggccagcaactagcaagcggagcaaatgataaccttctacat
atatgggataaggcaatggcttcttcaacccggtggctgcatagattcgaagatcacaca
gctgctgtgaaagctcttgcttggtgtcccttccagagtaatttgcttgcctctggtggg
ggtgcaggagaccgttgtataaagttttggaacactcgaacaggttcctgcttgaattca
gtggacactggttcacaagtttgctgtctgctctggaacaagaatgagcaggagcttctg
agctctcatgggttcacagataatcaactaactctgtggaaatacccatctatggtaaag
atggcagagcttactggtcatacgtcaagagttctattcatgactcagagtccaagtggc
tgcactgtggcatctgcagcagcagatgaaacattaagattttggaaagtttttgggagt
ccagaagcaggtaagcctgcaccaaaaacaaattcagagccatttgcaaatgtaagccgc
atcagatag
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