Telopea speciosissima (New South Wales waratah): 122646826
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Entry
122646826 CDS
T07910
Name
(RefSeq) double-strand break repair protein MRE11-like isoform X1
KO
K10865
double-strand break repair protein MRE11
Organism
tss
Telopea speciosissima (New South Wales waratah)
Pathway
tss03440
Homologous recombination
tss03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
122646826
03450 Non-homologous end-joining
122646826
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tss03032
]
122646826
03400 DNA repair and recombination proteins [BR:
tss03400
]
122646826
DNA replication proteins [BR:
tss03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
122646826
DNA repair and recombination proteins [BR:
tss03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
122646826
BRCA1-C complex
122646826
NHEJ (non-homologous end-joining)
MRX complex
122646826
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Mre11_DNA_bind
Metallophos
PspAA
Motif
Other DBs
NCBI-GeneID:
122646826
NCBI-ProteinID:
XP_043696370
LinkDB
All DBs
Position
1:complement(55155394..55202118)
Genome browser
AA seq
729 aa
AA seq
DB search
MGDSSRKETSNTIRVLVATDCHLGYMEKDEVRRHDSFQAFEEICSIAEQKQVDFLLLGGD
LFHENKPSRTTLVKTIEILRRYCLNDRPVQFQVVSDQTMNFANMFGHVNYEDPHFNVGLP
VFSIHGNHDDPAGVDNLSAIDILSACNLVNYFGKMILGGSGVGHIALHPILVRKGSTSVA
LYGLGNIRDERLNRMFQTPHAVQWMRPESKEGCPVSDWFNILVLHQNRVKSNPKNAINEH
FLPRFLDFIVWGHEHECLVDPQEVPGMGFHITQPGSSVATSLIEGEAKPKHVLLLEIKGN
QYRPSKIPLKSVRPFEYAEVVLKDEKEIDPNDQTSILEHLDKVVGNLIENSSRKAVSGSE
IKLPLVRIKVDYSGFMTINPQRFGQKYVGKVANPQDILIFSKASKRHQSHGEKIEDSERL
RPEELNQQNIEALVAESNLKMEILPVNDLDVALHDFVNKDDKMAFYSCLQYNLEETRNKI
CQESDNLKFEEEDLVVKVEKCMQDRVKERSTCSKADPQFTSISQSVQDSRDRSKTRVGSQ
VSFSDDEDTTQMPSSSKPTARGRKQSQASRSSQDASALGKSRTSTRGRGRGRGTSNLKQT
TLDAMRIRHSERSASISTSAAVRSMVEEEEDVDSASNDELEGHGIDDAEGSSENEENLLG
RGRKRAAPRGRGRGRMSSSKRGRKSDNSSNQKFLMNQDDDDDDGDENDRASRIKKDQPRV
TRNYGALRR
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgggagactcttcaaggaaggaaaccagtaacacaattagagtgcttgttgcaactgat
tgccatctgggttatatggagaaggatgaagtacgacgacatgattcgtttcaggcattt
gaggagatatgctcaatagctgagcaaaaacaggtggattttctacttcttggaggtgat
cttttccatgagaataagccttcaagaacaactctagttaagaccattgagatcctccgc
cgctattgtctcaatgatcgaccagtgcagtttcaagttgtcagtgaccagacgatgaat
tttgcaaacatgtttggtcatgtaaattatgaagatcctcacttcaatgttggcttgcca
gtgttcagtattcatggaaatcatgatgatcctgcaggagtggacaacctttctgcgatt
gatatcctctctgcgtgcaatcttgtgaattattttgggaaaatgattcttggaggatct
ggtgttggtcacatcgccctccatcctattcttgtcaggaagggttcaacatctgtagct
ctgtatggcctaggtaacatcagagatgaaaggctcaatagaatgtttcagacaccacat
gccgtacaatggatgcgacctgaatcgaaagaagggtgtccagtgtcagattggttcaac
attctggtactccatcaaaacagggtaaagtcaaaccctaaaaatgcaataaatgagcac
ttcttgccacgtttcctggacttcatagtatgggggcatgaacatgagtgcctggttgac
cctcaggaagttccagggatgggcttccatataactcaaccgggatcgtctgttgcaact
tctctaattgagggggaagcaaagcctaagcatgtccttctcttagaaattaagggtaat
caatatcgtccgtctaagattccattaaagtcagtgaggcctttcgaatatgctgaggtt
gtactaaaggatgagaaggaaattgatcccaatgatcaaacatccattcttgaacatttg
gacaaagtggttggaaatttgattgaaaattctagcagaaaggctgtcagtggatcagag
atcaagcttccattagtccgaataaaggtagattactctgggtttatgacaataaatcct
caaaggtttggacaaaagtatgtggggaaggttgcaaatccacaggacattcttattttt
tcgaaggctagcaaaaggcatcaatctcatggagagaagattgaggattctgagcgactt
cgcccagaagaactgaatcaacaaaatatagaggcgctggttgctgaaagtaatttgaaa
atggagatactcccagttaacgacttggatgttgctttacatgattttgttaacaaggat
gacaagatggctttctactcttgcttgcaatataatcttgaagaaacacgtaacaaaatt
tgtcaagaatcagataaccttaaatttgaagaggaagatttggtcgttaaagttgagaag
tgcatgcaggaccgtgtaaaggaaaggtctacatgctctaaagcagatccacagtttaca
tccatttcacagtccgtacaggattccagagatagaagtaaaaccagagttggaagtcaa
gtttcatttagtgatgatgaagacaccacccaaatgccctcaagctcaaagcctactgcc
agaggcagaaaacaatctcaagcttccaggtcctctcaagatgcttcagcacttggtaaa
agcagaacttctacaagaggcaggggtaggggcaggggcactagtaacttaaagcaaacc
actctcgatgctatgagaatccgccattctgagagatctgcatcaatttccacttctgct
gcagtccgcagtatggtggaggaagaagaggatgtggattctgcttcaaatgatgaactg
gagggacatggaatagatgatgctgagggcagttcagagaatgaagaaaatctccttggc
agaggacggaaaagagctgccccaaggggcaggggcaggggccgcatgtcatcctccaag
cgaggaaggaaatcagataattcttccaatcagaagtttctcatgaatcaggatgatgat
gatgatgatggtgatgagaatgacagggcaagcaggattaagaaggatcaacctcgggtg
acacgaaattatggtgctttgaggaggtga
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