Telopea speciosissima (New South Wales waratah): 122647307
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Entry
122647307 CDS
T07910
Name
(RefSeq) autophagy-related protein 13a isoform X1
KO
K08331
autophagy-related protein 13
Organism
tss
Telopea speciosissima (New South Wales waratah)
Pathway
tss04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
122647307
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tss04131
]
122647307
03029 Mitochondrial biogenesis [BR:
tss03029
]
122647307
Membrane trafficking [BR:
tss04131
]
Autophagy
Autophagosome formation proteins
ULK complex
122647307
Atg1 complex
122647307
Mitochondrial biogenesis [BR:
tss03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
122647307
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
122647307
NCBI-ProteinID:
XP_043696664
LinkDB
All DBs
Position
Unknown
AA seq
628 aa
AA seq
DB search
MALQNNPQSESGRSEQIISQFLLKSLHIVLDSRIPSLRPHDHSGDLTPVSRVRKSDRWFN
LALGERPAALENLNFWHRNVMDPMIIDVILVHDESTSSAVDEFYSTSGMDASAETVIERW
IVQYESRTTVPQLLESPASYKKMYKKSIILLRSLHSTLRLLPAYRIFRQLCSSNQTYNFD
IIYKVSSFSEPFSRAEEDAMKHYSFVPIEAPPGRLCISVTYRPTLSDFNLEPSALLPPQI
ITDYVGSPATDPLKIFSSTEKGVQPTSFPLRGTRSPSSAPFQRPHSWTSGIHRAAPFSQN
HHLGGSPTAYRSSHLPSDYPISPPDFYGHKIQGYRPPTHKKGISFDEYPLSPPFSSSPTP
SPPTYSSGGNLLQNRLRSGSAPVSIPLPMMGRNHRYLTPNFSDPNRHSLPPMSPRSTKPD
LSSQESPSGSRSFRKADILKAGELYSGLTNLYLGQKVFKDSKDDSGRFTGLVSSSGSPKI
GFSRSSSRLSFQDDLDDCDFSCPFAVDDVDSSDTQNRSGRSLEGKETTESTSQVFSSSRK
SQDAAVGVLVHMLRTAPPLRQDHSCYSSNSPSELEGEASAASGFFVPRRTADALAELRSY
REMKDLLLSQSGTSLVNKEESKPADFVG
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atggctctgcagaataatccacagtccgaatctggacgatccgaacagataatatcacag
ttcctcttgaagagcttacacattgttttggattcaaggattccttctctacgtccgcat
gatcatagtggcgacctgacgcctgtgtctcgtgtgaggaaaagcgacagatggtttaac
ttagcccttggagagcgccccgcagctctggagaatttgaatttctggcataggaacgtt
atggaccctatgataatcgatgtgatactggtccatgatgagtcaacgtcttccgctgtg
gatgaattctactctacttcgggaatggatgcttcagcagagacggttatagagagatgg
attgttcaatacgagtccaggaccacggttcctcaattgctcgagagtcctgcttcctat
aagaagatgtataagaaatccatcatactcctacgttcccttcattcgacattgaggctt
ctgccagcttatcggatatttcggcagctatgttcgtcaaaccagacatataattttgat
atcatttataaggtttcatctttcagtgaaccgttttcgagggcagaggaggatgccatg
aaacattacagttttgtacccatagaggctcctcctggtcgcctttgtatatccgttaca
tatcgccccacactatcagatttcaaccttgagccgtctgcattgttgccaccacagata
attactgattatgttggaagccctgcaactgaccctctgaagattttctctagtacggag
aaaggtgttcagccgacctcatttccattgcgagggactcgctcgccctcatctgctcca
tttcagcgcccacatagctggactagtggcatacatagagcagctcctttcagtcagaat
catcacctcggtgggtctcccactgcttaccgtagctctcatttgccttctgattatcct
atttctccccctgacttctatggccacaagattcaaggttataggcctccaactcataaa
aagggtattagttttgatgaatatccgctttctcctccattctcatcttctccaacaccg
tctcccccaacatattcttctggtggtaacctcttgcaaaatcgtctacgttcaggaagt
gctcctgttagtattccgctgccaatgatgggtagaaatcataggtatcttactcctaac
ttctctgacccaaatagacactctcttccacccatgtcccccagaagcacaaagcctgat
ctttcttcccaggaatctccatcaggaagtaggtcttttaggaaggcggatattttaaaa
gcaggagagctctattctgggcttacaaatctttacttgggacagaaggtcttcaaagat
agtaaagacgattcagggcgattcacgggattggtttcttcaagtggttctccgaagatt
ggattttcaaggagttctagccgattgtctttccaggatgatttagatgattgcgacttt
tcttgtccttttgctgtagatgatgttgattcatcagatactcaaaacaggtctggcagg
agccttgaagggaaagaaactactgagtctacttcacaagtgttctcatcgagcagaaaa
tctcaagatgctgctgttggcgttcttgttcacatgctaaggactgcaccacctttacgc
caagaccatagttgttactcatctaattctccaagtgaacttgagggagaagctagtgcc
gcttctggtttctttgtgccccggaggacagctgatgcactggctgaactcagaagttac
agagaaatgaaggacctactcctctctcagagtggaacgtcgctggttaacaaagaagaa
tcaaaaccagctgattttgttggataa
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