KEGG   Telopea speciosissima (New South Wales waratah): 122647543
Entry
122647543         CDS       T07910                                 
Name
(RefSeq) UBP1-associated protein 2B-like
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
tss  Telopea speciosissima (New South Wales waratah)
Pathway
tss03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tss00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    122647543
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tss03019]
    122647543
   03041 Spliceosome [BR:tss03041]
    122647543
Messenger RNA biogenesis [BR:tss03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     122647543
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     122647543
Spliceosome [BR:tss03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    122647543
SSDB
Motif
Pfam: RRM_1 RRM_7 Pox_Ag35
Other DBs
NCBI-GeneID: 122647543
NCBI-ProteinID: XP_043696864
LinkDB
Position
1:7112336..7123152
AA seq 403 aa
MAKNKNKKRKVSQTPNKKPQKKVDKKKKKQVEKAPAIVKEEYSDDSLSEPELESEKIQKL
IEPYNKDQLIEFICDAAVKDSTILQSIRSIADRDISHRKIFVHGLGWDTTRETLISAFKS
YGEIEDLNVVMDRATGKAKGYGFVIFKTRAAANKALKQPQKKINNRVTQCQLASIGPAPA
VQNYDTTGRKIYVSNVHSDADAEKLRTFFAKFGEIETGPMGFDSSTGKSRGFALFVYKTQ
EGAKKVLEEPYKMFEGHQLHCQKASENKHKPAIAVQQPVQTPVLAAVAASQNLALFSQHP
TLNPLYSGLLGNPNAGFVAGSFNPMMAGALNPIAIPSTQVAGSSFGNAMGIGGYGAPYGL
GTFGGNPSLLGPYGSSATALQGLQSYQSSNMQPSSGAFPGYLS
NT seq 1212 nt   +upstreamnt  +downstreamnt
atggcgaagaacaaaaacaagaagcgaaaggtctcgcagacaccgaacaaaaaaccccag
aagaaagtagacaagaagaagaagaagcaagtcgagaaagcccctgctatcgtgaaggag
gaatactctgacgactcattgtctgaacccgaattggagtccgagaagattcagaagctc
atcgaaccctacaacaaagaccaattgatcgaatttatctgcgacgccgctgtcaaagat
tctactatcctccagagcattcgttctatcgccgatcgcgacatctcacaccgcaagatc
ttcgtccatggacttggctgggacactacccgtgaaaccctaatctccgctttcaaatcc
tacggtgagatcgaggacttgaatgtcgtaatggacagggcgactggtaaggcaaaaggg
tatggtttcgttatctttaagactcgagcggccgcaaataaagctctgaaacagccccag
aagaagatcaacaatcgcgttacccagtgtcaattagcttctattgggccggctcctgcg
gtccagaactacgatacgacgggtcggaagatctatgtcagcaatgttcattctgacgca
gacgcagagaaacttcggaccttctttgccaagtttggcgagatcgagacgggtccgatg
ggtttcgattcctcaacggggaagtctcgtggttttgctctatttgtatataagacgcaa
gagggagctaagaaggttcttgaggaaccgtacaagatgtttgaggggcatcagttgcat
tgtcagaaggcctctgagaacaagcacaagcctgcaattgcagtgcagcagcctgtacaa
actccggtactggctgctgtggcagcttcgcaaaatttggctttatttagtcagcaccca
actcttaatccattatatagtgggttgcttgggaacccaaatgctgggtttgttgcaggc
tctttcaatcccatgatggcaggtgctctgaaccccattgcgattccatctactcaagtt
gctgggagttctttcgggaatgccatggggataggaggatatggtgcaccgtatgggttg
ggtacttttgggggaaatccttcgctgcttgggccgtatggttctagtgccacagctttg
caaggtctgcaatcttatcaaagctcaaacatgcagccatcttctggggcttttcctggt
tatctatcttag

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