Telopea speciosissima (New South Wales waratah): 122647690
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Entry
122647690 CDS
T07910
Name
(RefSeq) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
tss
Telopea speciosissima (New South Wales waratah)
Pathway
tss03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
122647690
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tss03021
]
122647690
03400 DNA repair and recombination proteins [BR:
tss03400
]
122647690
Enzymes [BR:
tss01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
122647690
Transcription machinery [BR:
tss03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
122647690
DNA repair and recombination proteins [BR:
tss03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
122647690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
RNA_pol_L_2
Motif
Other DBs
NCBI-GeneID:
122647690
NCBI-ProteinID:
XP_043696980
LinkDB
All DBs
Position
Unknown
AA seq
328 aa
AA seq
DB search
MVREEVAVSTRTLEWKCVESRADSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT
CITRAKSEKIPHEYSTIVGIEESVHEILMNLKEIVLRSNLYGTRNASICVRGPGYVTAQD
IISPPSVEIVDTTQHIASLTDPIDLCIELQIERRRGYHMKTLNNSQDLSYPIDAVFMPVR
NANYSIHSYGNGNQKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAQEEDIQLQ
DNQNGVALPFFIFHDRLAKLSKNKKAMAWKHIFIDQLELSPKSYNCLKRSNIHTLLELLN
KSEEDLMEMKDLGLEDLKKIVSILEKDF
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atggttcgagaggaagtagcagtatctactcgtacactagagtggaagtgtgttgaatca
agagcagacagtaagcgtctttattatggacgttttattctgtctccgcttatgaaaggt
caagccgatacaataggcatcgcaatgcgaagggctttacttggagaaatagaaggaaca
tgtatcacacgtgcaaaatctgagaagataccacatgaatattctaccatagtaggtatt
gaagaatcagtacatgaaattttaatgaatttgaaagaaattgtattgagaagtaatctg
tatggaactcgcaacgcatctatttgcgtcaggggtcctggatacgtaactgctcaagac
atcatctcaccgccttctgtggaaatcgttgatactacacagcatatagctagcctcaca
gacccaattgatttgtgtattgaattacaaatcgagaggaggcgcggatatcatatgaaa
acactaaataactctcaagatctaagttatcctatagatgctgtatttatgcctgttaga
aatgcgaattatagtattcattcttatgggaatggaaaccagaaacaagagatccttttt
ctcgaaatatggacgaatggaagtttaactcctaaagaagcactttacgaagcctctcgg
aatttgattgatttatttatcccctttctacatgcacaagaagaggacattcagttacag
gacaatcaaaacggggttgctttacctttttttatctttcatgatagattggctaaatta
agcaaaaacaaaaaagcaatggcatggaaacacatttttattgaccaattagaattgtct
cccaagtcctataattgcctcaaaaggtccaatatacatacattattggaacttttgaat
aagagtgaagaagatcttatggaaatgaaagatcttggcctagaagatctaaaaaagata
gtgagcattctagaaaaggatttctga
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