Telopea speciosissima (New South Wales waratah): 122648025
Help
Entry
122648025 CDS
T07910
Name
(RefSeq) small RNA degrading nuclease 1-like isoform X1
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
tss
Telopea speciosissima (New South Wales waratah)
Pathway
tss03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
122648025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tss03009
]
122648025
Ribosome biogenesis [BR:
tss03009
]
Eukaryotic type
Pre-60S particles
RNases
122648025
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
Takusan
Bap31_Bap29_C
Motif
Other DBs
NCBI-GeneID:
122648025
NCBI-ProteinID:
XP_043697235
LinkDB
All DBs
Position
Unknown
AA seq
497 aa
AA seq
DB search
MSPMDKKIDAAEKEVLAEIVRWTQKHGMKGAKGGWKEFLNFYDKRFGSSVSDPARRTVDT
LAAFLKTFMKDEDLKVLAKVMRCHSNRKALVELSKSSPDLESPQQRLVRLTLEHPQYSLN
YSFPSHSEEWVVTKLGKSSKALKSNAMAAIDCEMVLCEDGTEAVVKVCLVDHNLEVKLNE
LVNPNKAVADYRTHITGISAKDLRRINCSLADVQESLKKLLSCGTILVGHSLNNDLRALK
LDHARIIDTSFIFEVLDGPRNPSLKDLCKSVLGYELRKEGAPHNCLDDARAAMKLVLAKI
EHGFDDAIKLPRKDVPESEQEKLLLHRIPVDVSIQELRNIFPEEFKIEFQAKGNARGQKY
SVFSIFKDRQKANEAFERVQGDVQQDSCGLPQKLVSIQLRTGLTANLYVRKMACADPSDQ
STSLEKRLAQVEELINKSKKQKTDMVVTEELAEPKTISDQCTHVKEIERLKQELRQKDDE
LHNLQKILSALTRKHGL
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgtcgccaatggacaagaagattgacgctgcagaaaaggaggttctcgctgaaattgtg
aggtggacccaaaaacatggtatgaagggtgccaaagggggctggaaagagtttttgaat
ttctatgataaaaggttcggttctagcgtaagtgatcctgcacgaaggacagtggataca
ttggctgcatttttgaagacatttatgaaagatgaagatttaaaggttttggcaaaagta
atgcggtgccattcgaaccgtaaagcacttgtggaactttctaagagttctccagacctt
gagtcccctcaacagaggctggtccgcctgactcttgaacacccacagtactcattaaat
tactcattcccatcccatagtgaggaatgggtggttacaaagcttggtaaaagttcaaaa
gccttgaagtccaatgcaatggctgctattgattgtgagatggttctttgtgaagatggt
acagaagccgtagtgaaagtatgtcttgtggatcacaatttggaggtcaaacttaatgaa
cttgttaacccaaataaagctgttgccgattatagaactcatattactggaatctctgcg
aaggatttgcgcagaattaattgttcattggcagatgtacaggaatcattgaagaagcta
ctgtcatgtgggaccattttagttggccatagtttgaataatgatctacgtgcattaaag
ttggatcatgcaagaataattgatacatcttttatcttcgaagttctggatggacccaga
aatccttctttgaaagatttgtgtaagtctgtgttgggctatgaacttcggaaggaaggt
gctccacataattgtcttgatgatgcacgtgctgcgatgaaattagttcttgccaagata
gagcatggttttgatgatgctataaagttaccccgcaaagatgtacctgaatctgaacag
gaaaagctgctgcttcacagaataccagttgatgtttctatacaagaattgcggaacata
tttccagaggaattcaaaatagaatttcaggcaaaaggaaatgctcgaggacaaaaatac
tctgtattttccatttttaaagatcgacagaaggcaaatgaagcatttgaaagagttcaa
ggagatgtacagcaggattcatgtggactgccccagaaactagtttcgattcagcttagg
actggactaactgccaatctctatgtccgtaagatggcatgtgctgatccctctgaccaa
tctacttctttggaaaagagattagcccaagttgaagagctcatcaataagtccaagaag
cagaagacagatatggtggtcactgaggaattggcagagccaaagacaatttcagatcag
tgtactcatgtcaaagagatcgaaagattgaagcaggaactgcgccagaaggatgatgaa
cttcataacctgcagaagatactctctgctcttacgaggaaacatgggctttga
DBGET
integrated database retrieval system
