Telopea speciosissima (New South Wales waratah): 122648485
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Entry
122648485 CDS
T07910
Name
(RefSeq) clathrin heavy chain 1
KO
K04646
clathrin heavy chain
Organism
tss
Telopea speciosissima (New South Wales waratah)
Pathway
tss04142
Lysosome
tss04144
Endocytosis
tss05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
122648485
04142 Lysosome
122648485
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
122648485
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tss04131
]
122648485
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tss04147
]
122648485
Membrane trafficking [BR:
tss04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
122648485
Exosome [BR:
tss04147
]
Exosomal proteins
Proteins found in most exosomes
122648485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
Motif
Other DBs
NCBI-GeneID:
122648485
NCBI-ProteinID:
XP_043697626
LinkDB
All DBs
Position
1:15887190..15906780
Genome browser
AA seq
1701 aa
AA seq
DB search
MAAASAPITMKEVLTLPSIGINSQFITFTHVTMESDKYICVRETAPQNSVVIIDMNMPMQ
PLRRPITADSALMNPNSRILALKAQLPGTTQDHLQIFNIELKSKMKSHQMPEQVVFWKWI
SPKMLGLVTQTSVYHWSIEGDSEPVKMFERTANLVNNQIINYKCDPSEKWLVLIGIAPGS
PERPQLVKGNMQLFSVDQQRSQALEAHAASFASFKVPGNENPSTLICFASKSTNAGQITS
KLHVIELGAQPGKPSFTKKQADLFFPPDFADDFPVAMQISHKYSLIYVITKLGLLFVYDL
EMATAVYRNRISPDPIFLTTEASSVGGFYAVNRRGQVLLATVNEATIVPFVSGQLNNLEL
AVNLAKRGNLPGAENLVVQRFQELFAQTKYKEAAELAAESPQGLLRTPDTVAKFQSVPVQ
AGQTPPLLQYFGTLLTRGKLNAFESLELSRLVVNQNKKNLLENWLAEDKLECSEELGDLV
KTVDNDLALKIYIKARATPKVVAAFAERREFDKILIYSKQVGYTPDYLFLLQTILRSDPQ
GAVNFALMMSQMEGGCPIDYNTITDLFLQRNLIREATAFLLDVLKPNLPEHGFLQTKVLE
INLVTFPNVADAILANGMFGHYDRPRIAQLCEKAGLFVRALQHYTELPDIKRVIVNTHAI
EPQSLVEFFGTLSKEWALECMKDLLLVNLRGNLQIIVQTAKEYCEQLGIDACIKLFEQFK
SYEGLYFFLGSYLSSSEDPDIHFKYIEAAAKTGQIKEVERVTRESNFYDAEKTKNFLMEA
KLPDARPLINVCDRFGFVPDLTHYLYSNNMLRYIEGYVQKVNPGNAPLVVGQLLDDECPE
DFIKGLILSVRSLLPVEPLVDECEKRNRLRLLTQFLEHLVSEGSQDVHVHNALGKIIIDS
NNNPEHFLTTNPYYDSRVVGKYCEKRDPTLAVVAYRRGQCDDELINVTNKNSLFKLQARY
VVERMDGDLWEKVLSPDNEYRRQLIDQVVSTALPESKSPEQVSAAVKAFMTADLPHELIE
LLEKIVLQNSAFSGNFNLQNLLILTAIKADPSRVMDYINRLDNFDGPAVGEVAVEAQLYE
EAFAIFKKFNLNVQAVNVLLDNIQSIERAVEFAFRVEEDAVWSQVAKAQLREGLVSEAIE
SFIRAEDATEFLDVIRAAANANVYHDLVRYLLMVRQKTKEPKVDSELIYAYAKIDRLGDI
EEFILMPNVANLQNVGDRLYDEALYEAAKIIFAFISNWAKLAVTLVKLRQFQGAVDAARK
ANSSKTWKEVCFACVDAEEFRLAQICGLNIIIQVDDLEEVSDYYQNRGCFNELINLMESG
LGLERAHMGIFTELGVLYARYRTEKLMEHIKLFSTRLNIPKLIRACDEQQHWMELTYLYI
QYDEFDNAATTIMNHSPEAWDHMQFKDVSVKVANVELYYKAVHFYLQEHPDLINDLLNVL
ALRVDHTRVVDIMRKAGYLHLIKPYMVAVQSNNVSAVNEALNEIYVQEEDYDRLRESIDM
HDNFDQIGLAQKVEKHELLEMRRIAAYIYKKAGRWKQSIALSKKDNLYKDAMETCSQSGD
RELSEELLVYFIEQGKKECFASCLFVCYDLIRPDVALELAWMNNMIDFAFPYLLQFIREY
TSKVDELVKDRIEARSEVKAKEQEEKDMVAQQNMYAQLLPLALPAPPSMPGMGGGYGPPP
PMGGMGMPPMPPFGMPPMGSY
NT seq
5106 nt
NT seq
+upstream
nt +downstream
nt
atggccgctgcaagtgctccgatcaccatgaaggaggtcttaactttgccaagcatcgga
ataaattctcaatttatcacattcacccatgttaccatggaatccgacaagtacatttgt
gttcgggaaacagcaccgcagaacagtgttgttatcattgatatgaacatgcctatgcag
ccgctgagaaggcctattactgcagattcagctttgatgaatcctaattccaggattctt
gccctcaaagcccaacttccaggaacaactcaggatcacttacaaatattcaacattgaa
ttgaaatctaaaatgaaatctcatcagatgcctgaacaggttgttttttggaagtggatt
tccccaaagatgttggggcttgtcacacagacatctgtatatcactggtcaattgaaggt
gactctgagcctgtaaagatgtttgagagaacagctaatttggtgaataaccaaattatt
aactataaatgtgatccttcggaaaagtggttggttttgattggaatagctccaggctca
cctgagaggccacaactggttaaggggaatatgcagcttttttctgtggatcagcagcgc
agtcaagctcttgaagcacatgctgcatcatttgcctcattcaaagttcctgggaatgag
aacccttccactcttatctgttttgcctcgaagagcaccaatgctggccaaattacatcg
aagttacatgtgattgaacttggtgcccaaccaggcaaaccgagttttacgaagaaacaa
gcagatcttttcttcccacctgattttgctgatgatttcccagtggcaatgcagatatcc
cacaagtacagtttgatatatgtgatcacaaagcttggacttctgttcgtatatgacctg
gagatggcaactgctgtttacagaaatcgtataagccctgatcctatctttctgacaaca
gaagcatcttcagtaggaggcttctatgctgtcaataggcgtgggcaggtcttacttgct
actgtaaatgaagcaacaattgtgccatttgtcagtggccaattaaacaatctggagctt
gctgtcaatcttgctaaaagaggaaaccttcctggggcagagaatctggttgtccagcga
ttccaagaattgtttgcccagacaaaatataaggaggctgcggaacttgctgcagaatct
ccacagggacttcttcgtactcctgatactgttgcaaaatttcagagtgttcctgtgcaa
gctgggcaaacacctcccttgttacagtattttgggacactattgacaagaggaaagctc
aatgcatttgagtcactggaattatcacgccttgttgtaaatcagaataaaaagaatctt
ctggagaattggttggccgaggacaagcttgagtgcagtgaggagcttggcgatcttgtt
aagactgtggataatgatcttgctctgaaaatatatatcaaggctcgagctaccccaaaa
gttgtcgcagcttttgctgaacgaagagaatttgataaaattcttatctactcaaagcag
gttggctacacgcctgattatctcttccttctgcaaacaattttgcgatcagatccccag
ggtgctgttaatttcgctttaatgatgtcacaaatggagggaggttgtccaattgactac
aacacgataacagatcttttccttcagaggaacctgatccgtgaggcaacagcgtttctg
ttagatgttctgaagccgaatttaccagaacatggttttcttcaaaccaaggtcctggag
ataaatctagtgacatttccaaatgtagctgatgccatattagctaatgggatgttcggt
cactatgatcgtcctcgaattgcacaactttgtgaaaaggcgggtctatttgtgcgtgct
cttcagcactatactgaattgccggatatcaagcgtgtcattgtgaatacgcatgccatt
gagccacagtcccttgtagagttctttggaaccctctctaaagaatgggcgctggagtgc
atgaaagaccttttacttgtgaatctgagagggaatctgcagataattgttcagactgcc
aaagaatactgcgagcagttggggattgatgcatgtataaaactctttgagcaattcaag
tcttatgaaggattatacttcttcttggggtcatatttgagctctagtgaggatccagac
attcacttcaagtacattgaggcagctgctaaaactgggcaaatcaaagaggttgagcgt
gtgacgagggaatcgaacttctatgatgctgagaagacaaagaactttctaatggaagca
aagcttcctgatgcacggcccctaattaatgtctgtgatcgatttgggtttgttccagac
ctcacgcattatctgtactctaacaacatgctgagatatattgaaggctatgttcaaaag
gtcaacccagggaatgctcctctagttgtggggcagctgctggatgatgaatgccctgaa
gatttcattaaaggccttattttatctgtgcggtccctactacctgtggagccacttgtt
gatgaatgtgaaaagaggaatcgtctccgtttgctcactcagttcttggagcatcttgtg
agtgagggaagccaggatgtgcatgttcacaacgccctgggtaaaatcataatagatagc
aacaataatccggagcatttcctcaccacaaatccctactatgattcacgtgtggtgggt
aaatattgtgagaaacgtgaccccaccctagctgttgttgcttaccgtagagggcagtgt
gatgatgagctgatcaatgtcacaaacaagaattcattgttcaaacttcaggccagatat
gtggtggaaaggatggatggtgacctctgggagaaagttctcagtcctgataacgagtat
agaaggcagctaatcgatcaagtggtatctactgccttgcctgaaagcaagagcccagag
caagtttctgctgctgttaaggctttcatgactgctgatcttccccacgaattaattgag
cttcttgagaagattgtgctccaaaactctgccttcagtggaaacttcaatctacaaaat
ctgctgatccttacagctattaaggcagatccatcaagagtaatggattacattaacagg
ttagacaacttcgatggacctgctgtaggagaggtggctgtggaagcacaactgtatgaa
gaagcatttgcaatcttcaagaagttcaacttgaatgtccaggctgtaaatgtcttgttg
gataacattcaaagcattgagcgtgctgtggagtttgcatttcgtgttgaagaggatgct
gtttggagccaggttgccaaggcccaactcagggagggtctagtgagtgaggcaattgag
tcatttatccgtgctgaggatgccactgagttcttagatgtcattcgagcagcagcgaat
gctaatgtgtaccacgatttggtgaggtaccttctgatggttaggcagaagacgaaggag
cccaaggtggacagtgagcttatttatgcatatgccaaaattgataggctgggtgacatc
gaggaattcattctcatgccaaatgttgctaatctccaaaatgtcggggaccgattgtat
gatgaagccctttacgaggcagcaaagattatatttgcttttatttctaactgggccaag
ctggctgtcacacttgtgaagctaagacagttccaaggtgcagttgatgcagctcgaaaa
gcaaacagctccaagacttggaaggaagtatgctttgcttgtgttgatgctgaggagttt
cgcctggcacagatatgtgggctcaacatcattatacaggtggatgatttggaagaagtc
agtgattactaccagaatagaggatgcttcaacgaattgattaatctgatggagagtggt
ctaggattggaacgtgcacatatgggcatctttactgagttgggagttctatatgctaga
taccgtacagagaagcttatggaacacattaaactgttctcaacgcgtctcaacattcca
aagcttatacgggcttgtgatgagcagcaacactggatggaactcacctatctgtatatc
caatatgatgagtttgacaatgctgcgactaccatcatgaaccattctcctgaagcctgg
gatcacatgcaatttaaagatgtttctgtcaaagttgcgaatgtggagctctactataag
gctgtgcatttctacttgcaggagcatcctgatcttattaatgatcttctcaatgtactt
gcacttcgtgtggaccatacacgtgtagtggacataatgcggaaggcaggttatcttcac
cttatcaagccatacatggttgcagtccagagcaacaatgtttctgctgtgaatgaggct
ctaaatgagatatacgttcaagaggaggattatgataggttaagagaatcaattgatatg
cacgacaacttcgatcaaataggccttgcacaaaaggtcgagaaacacgagcttctggag
atgaggcgcatcgctgcttatatttataagaaagctggacgatggaagcagtccattgca
ttgtctaagaaagacaatctttacaaagatgccatggaaacatgttcacaatctggtgac
cgtgaactttcagaggagttgcttgtttatttcattgagcagggaaagaaggaatgcttt
gcttcgtgcctcttcgtttgttatgatttaatccggcctgatgttgcccttgaacttgca
tggatgaacaatatgatagattttgcctttccatatctattacagttcattcgtgaatac
acgagcaaagttgatgagcttgtaaaggatagaattgaagctcgtagtgaagtgaaagct
aaagagcaggaggagaaggatatggttgctcagcagaatatgtatgctcagttgcttcct
ctagccttgcctgcaccaccctcaatgccaggtatgggaggaggctacggacccccacca
ccaatgggagggatgggaatgcccccaatgccaccttttggcatgcccccaatgggctca
tactga
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integrated database retrieval system
