Telopea speciosissima (New South Wales waratah): 122648492
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Entry
122648492 CDS
T07910
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 18
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
tss
Telopea speciosissima (New South Wales waratah)
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tss03009
]
122648492
Enzymes [BR:
tss01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
122648492
Ribosome biogenesis [BR:
tss03009
]
Eukaryotic type
Pre-60S particles
Helicases
122648492
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
HTH_TIMELESS
CTT_SPB4
Motif
Other DBs
NCBI-GeneID:
122648492
NCBI-ProteinID:
XP_043697631
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All DBs
Position
1:24751360..24759669
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AA seq
593 aa
AA seq
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MALVSKDVPNRALTDLRFSDLKPSLSAPVLDALSQTGFHFCTPVQAATIPLLCSFKDVTV
DAATGSGKTLAFVVPLVEILRRSSERPKPHQVVGVIISPTRELSSQIYHVAQPFVSTLPN
VKAVLLVGGLDLKADMKKIEEEGANLLIGTPGRLYDIMERMDILDFRNFEVLILDEADRL
LDMGFQKQITSIISRLPKLRRTGLFSATQTEAVEELSKAGLRNPVRVEVRAEAITQDELA
SSQQLASSKTPLGLNMEYLESEADKKSSQLVDFIKDNMSRKIIVYFMTCACVDYWGVVLP
RLSALKGCPLISLHGRMKQQAREKALASFTSLSSGILLCTDVAARGLDIPGVDWIVQYDP
PQDPNVFVHRVGRTARMGRSGSAIVFLLPKEEAYVEFLHIRRVPIVERKCSDNALDIIPQ
IRAAAKKDRDVMEKGLKAFVSYIRAYKEHQCSYIFRWKELEIGKLAMGYGLLQLPAMPEV
KHHSLSIEGFTAAEDINLTEIKYKDKSREKQRQRTLKAKKAAEHQQAKPLKPKVNQNATA
TIMRKKTAKQRRAAQTIEDEDELDREYRLLKKLKKGTIDETEFAKLTGTEELL
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atggcattggtgtcgaaggacgttcccaacagagccttgacggaccttcgcttttccgat
ctcaaaccctctctgtcggctcccgtgctcgatgccctatcccaaactggttttcacttc
tgcacaccagttcaagccgcaacaattcccctactctgtagctttaaagatgtcactgta
gacgccgccactggttctgggaaaaccctagcgtttgttgttccccttgtcgagatcctc
cgtcgttcttcggagcgcccaaaacctcaccaggttgtgggtgtaattatctctccaaca
agagagttatcatcacaaatataccatgttgcacagcctttcgtttcaacattaccgaat
gttaaggcagtgcttcttgttggaggattagacttaaaggctgacatgaagaaaatagag
gaggaaggagcaaatttattgataggcacacctgggaggttatacgacataatggaacgc
atggatatcttggatttccgaaattttgaggtcttaatattagacgaggctgataggctc
ttggatatggggtttcaaaagcagataacttccattatatctcggttaccaaagctgcgt
agaactggtcttttttctgctacccaaactgaggcagttgaagagctctccaaagcaggg
ctgaggaatcctgtgagggttgaagttcgagcagaagccataacacaggatgagttggca
tcctcccaacaattggcctcttccaaaacacccttaggccttaatatggagtatctggaa
tctgaagcagacaaaaagtcatctcagcttgttgatttcataaaagataacatgtcgaga
aagatcatcgtgtactttatgacatgtgcttgtgttgattactggggggttgttcttcca
cgcctttctgctctcaaagggtgccccttaatttctcttcatggaaggatgaaacagcaa
gcgcgggaaaaggccttagcttcttttacttcactttcaagtggcattcttctgtgtact
gatgtagcagctcggggacttgacattccaggtgttgattggattgtgcagtatgatccc
ccacaggatccaaatgttttcgtacacagagttggtcggactgcacggatgggtcggtcg
ggaagcgctattgtttttctcttaccaaaggaggaagcttatgtggagttcttgcatata
agaagagtccccattgttgagaggaaatgttcagataatgctcttgatattattcctcag
ataagagctgctgcaaaaaaggatcgcgacgtcatggagaaaggattaaaggcgtttgtt
tcatacatccgcgcatataaggagcaccaatgttcctatattttcagatggaaagaactg
gagattgggaagttagcaatgggatatggcctgttgcagcttcctgcaatgcctgaagtg
aaacatcactctctttctattgaagggtttactgcagctgaagatatcaatttaacggag
attaagtataaagataaatctcgtgagaaacaaagacaaaggaccctgaaagcaaagaaa
gcagcggagcatcaacaagcaaagccacttaagcctaaagtcaatcaaaatgctacagct
actattatgaggaagaaaactgcaaagcagagacgggctgcccagacaattgaagatgaa
gatgagcttgatcgtgaataccgcttacttaaaaagctgaagaaaggaaccattgatgag
actgaattcgcaaagcttactggaacagaagagctgctttga
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