Telopea speciosissima (New South Wales waratah): 122648813
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Entry
122648813 CDS
T07910
Name
(RefSeq) polypyrimidine tract-binding protein homolog 3-like isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
tss
Telopea speciosissima (New South Wales waratah)
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tss03041
]
122648813
Spliceosome [BR:
tss03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
122648813
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RL
Nup35_RRM_2
TGF_beta
GlcNAc-1_reg
Motif
Other DBs
NCBI-GeneID:
122648813
NCBI-ProteinID:
XP_043697981
LinkDB
All DBs
Position
1:2502971..2514183
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AA seq
448 aa
AA seq
DB search
MTEPSKVIHIRNVGHEISENDLLQLLQPFGVVTKLVMLRAKNQALLQMQDVASAVSALQY
FANVQPSVRGRNVYIQFSSHQELTTMDQNTQGRKGDQDSQPNRILLVTIQHLLYPITVEV
LHQVFSPHGFVEKIVTFQKSAGSQALIQYQSRLSAVSARNALQGRNIYDGCCTLDIQFSN
LSELQVNYNNERSRDFTNPSLPSEQKGRSSQQSGYGDAGGLYALQPGAGAVAFPQIGNAA
AIAAAFSGGLPPGISGTNDRCTVLVSNLNTDKIDEDKLFNLFSIYGNIVRIKLLRNKPDH
ALVQLGDGFQAELAVHFLKGAMLFGKHLEVNFSKHANITSAPDTHEYVNSNLNRFNRNAA
KNYRYCCSPTKMIHLSTLPQDITEEEIIAHLEEHGNIVNTKLFEGNGKKQALVLFETEEQ
ATEALVCKHASTIDGSIIRISFSQLQTI
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgacagaaccttcaaaagtcatccacattcgcaatgtgggacatgaaatttctgagaat
gatctcctacagttgcttcagccttttggtgttgtcactaagcttgtcatgctgcgtgca
aaaaatcaggccctgctccagatgcaggatgtagcctcagctgtgagtgcattgcaatac
tttgcaaatgtgcagccgagcgtcagggggagaaatgtgtacattcaattctcttcacat
caagaactcactacaatggatcaaaatactcaaggacgcaaaggggatcaggactcacaa
cccaaccgaattctcttagtaacaatccagcacctgctctatcctataacagtggaagtg
ctgcatcaagtattttctcctcatgggtttgtggaaaagatcgtgacatttcagaagtct
gctggttctcaagcccttatccagtatcagtcacgcctgagtgccgtttcagcaagaaat
gctctccaaggtcgtaatatttatgatggttgctgtacgctggatattcaattttcaaac
ctaagtgagttacaagtgaactacaataatgaacggtcaagggatttcacgaacccatct
ttgccttcagaacagaaaggcagatcctctcaacagtctggatatggtgatgcggggggc
ctctatgcacttcaacctggagctggggcagttgcgtttccacagatcggcaacgctgca
gcaatagcagcggcatttagtggagggttgcctcctgggataagtggcactaatgacagg
tgcacagtcctggtctctaatctaaatactgataaaatcgatgaagataaactcttcaac
cttttctccatctacgggaacatagtgagaattaaacttcttcgcaacaaaccagatcat
gcactagttcaattgggtgatgggttccaggctgaattggctgtacacttcttgaaggga
gccatgctatttggaaagcatttggaggtgaatttctcgaagcatgcaaacattacatca
gctcctgacacacacgaatatgtgaactcaaacctaaatcgcttcaaccgaaatgctgca
aagaactaccgctactgctgttcccccactaagatgatccacttgtccactcttccccag
gatattacggaggaggagatcatagctcacttagaggagcatgggaacattgtaaacacc
aaactctttgagggaaatggaaagaagcaggcccttgtcctgtttgagacagaggagcag
gctacagaggcgcttgtttgtaagcatgccagcaccattgatggatcaatcatccggatc
tccttctcccagttgcaaacaatttaa
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