KEGG   Telopea speciosissima (New South Wales waratah): 122648883
Entry
122648883         CDS       T07910                                 
Name
(RefSeq) UBP1-associated protein 2A-like
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
tss  Telopea speciosissima (New South Wales waratah)
Pathway
tss03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tss00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    122648883
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tss03019]
    122648883
   03041 Spliceosome [BR:tss03041]
    122648883
Messenger RNA biogenesis [BR:tss03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     122648883
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     122648883
Spliceosome [BR:tss03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    122648883
SSDB
Motif
Pfam: RRM_1 RRM_7 Nup35_RRM_2 ORC3_ins
Other DBs
NCBI-GeneID: 122648883
NCBI-ProteinID: XP_043698110
LinkDB
Position
1:complement(7160568..7162866)
AA seq 468 aa
MAKKRKVDGEVDEEVDMSVTEPDANGEEGNERGEAEGLEVEEEEEEEDLTKLLEPFNKEQ
LIELLGIAVSNDSKVLEEIYRVADLDPAHRKIFVHGLGWETTTEKLREFFSQFGELEDCN
VVLDKATGKSKGYGFLLFKHRRHAQVALKEPQKKIESRMTACQLASSGPVNTVQSNSVPH
TQQTQHPSHDNLPKKIYVGNVHPDVPSDKLHAFFSKYGEIEEGPLGFDKKTGKSKGFALF
IYKTAEGARKALEEPNKSFDGHQLYCQKATDSHKLRSTAAAPISGGGGPAPAPGNVLGAG
GFNTPANAGGGFNAQGGVGFGASGGGGFNAPDGAMAQNASAASAAQLLGQGFFGGTFPFG
QGLPPNQAALAVLAAAGQNPAAFGVNPAVLASLNPAWAAAMNAAPHPVASTAQSTIPQAM
PGYGMGNPGYQNPQAYQANNSYQSGPMAQPHQQRPQSAVGQMGGYGAR
NT seq 1407 nt   +upstreamnt  +downstreamnt
atggcgaagaagcgaaaggtcgacggagaggttgatgaagaggttgacatgtcggtcact
gagcccgacgctaacggtgaagagggaaatgaaagaggagaagcagaaggattagaagta
gaagaagaagaagaagaagaagacttgacaaaactcttggagcccttcaacaaagaacaa
ctcatcgaacttctaggtatagccgtttctaatgattcaaaagtattagaagaaatctac
cgagttgccgaccttgatcccgctcaccgtaagatctttgtccatggactcggttgggag
accaccactgagaaactccgtgaattcttttcacagttcggtgagcttgaagattgcaac
gttgtcttagacaaggctacgggtaaatccaagggctatggtttcttgctcttcaagcat
cgtcgacacgctcaggtagcccttaaagaacctcagaagaagattgagtctcggatgact
gcttgtcagcttgcatcctctggtcctgtcaatacggttcagtcaaattcggttccacat
acgcagcagactcagcatccctcgcatgataatcttcctaagaagatttatgtaggtaat
gtgcatccggacgttccttctgataagttacatgctttcttctctaagtatggagagatt
gaagagggtcctttggggtttgataagaagacggggaaatctaagggttttgctcttttt
atttataagactgcggaaggggcgaggaaggctttagaagaaccaaacaagagtttcgac
gggcaccagttgtattgccagaaggcgaccgatagccataagcttaggtctactgctgct
gcccccatctctggaggtggcggacccgctcccgcccctgggaatgttctgggtgctggt
ggctttaataccccggccaacgcaggtggtggcttcaatgcacaagggggtgttggtttt
ggggcatccggtggtggtggttttaatgctccggacggggctatggctcagaacgcttcg
gccgcctctgctgcacaattgttaggtcaggggttctttggtggaacctttccgtttggt
caggggcttcctccgaatcaggcagcgcttgctgtattggccgctgctgggcagaatcca
gctgcttttggagttaaccctgctgttcttgcatcgttgaaccccgcttgggcagctgcc
atgaatgctgccccacatcctgttgcgtccactgcccaatcgacaataccgcaggcaatg
ccgggatatggaatggggaatccaggttatcagaacccacaagcttatcaagctaataac
tcgtatcagagtggcccgatggcgcagcctcatcaacaaaggccacaatctgctgttggg
caaatgggaggatatggtgcacgttag

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