Telopea speciosissima (New South Wales waratah): 122648994
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Entry
122648994 CDS
T07910
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT5-like
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
tss
Telopea speciosissima (New South Wales waratah)
Pathway
tss04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
122648994
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tss04121
]
122648994
Enzymes [BR:
tss01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122648994
Ubiquitin system [BR:
tss04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
122648994
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_2
DUF7567
FAIM1
Motif
Other DBs
NCBI-GeneID:
122648994
NCBI-ProteinID:
XP_043698271
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All DBs
Position
1:86960413..86976963
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AA seq
312 aa
AA seq
DB search
MELDSIECISSSDGIDEEEIHHHQFSTKPHNNIVSPAISPATSVHELLECPVCTNSMYPP
IHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKVAESLELPCKYCSLGCPEIFP
YYSKLKHEAQCNFRPYNCPYAGSECSVMGDIPFLVAHLRDDHKVDMHSGCTFNHRYVKSN
PREVENATWMLTVFNCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDETEARNYSYSLEVGA
NGRKLIWEGTPRSIRDSHRKVRDSHDGLIIQRNMALFFSGGDRKELKLRVTGRIWKEQQN
PDAGVCIPNLCS
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atggaattggatagcattgaatgtatctcgtcctcggacgggatcgacgaggaagagatc
catcatcaccagttctcgaccaagccccacaacaacatagtctccccagcgatttctccg
gccaccagcgtccatgagttgctcgagtgccccgtctgcaccaattccatgtacccaccc
atccatcagtgccacaatggccacacactgtgttccacctgtaaaacaagggtgcacaat
cgatgccccacttgtagacaggaacttggagacatcaggtgtctagctttagaaaaggtg
gctgagtcgcttgaactaccctgcaaatactgctccctgggctgcccagagatcttccct
tactacagcaagctcaagcatgaagcacagtgtaactttagaccatacaactgcccatat
gctggatcagagtgctccgttatgggggatatcccctttcttgttgcccatctgagggat
gatcacaaggttgacatgcacagtggatgcacattcaaccatcgttacgtcaagtctaat
ccccgtgaagttgaaaatgccacctggatgcttactgtcttcaattgtttcggtcagtac
ttctgtctgcactttgaagccttccagctcggcatggctcctgtgtacatggcattcctc
cgttttatgggagatgagactgaggctcggaactatagctacagcttagaggtaggggca
aatggccgtaaactcatatgggagggcaccccaaggagcatccgtgatagccaccggaag
gtcagggacagtcatgacggcctcattatccagcgaaacatggcacttttcttctctggt
ggggacaggaaggaattgaagctacgggttacagggcgcatctggaaggaacaacaaaac
ccagatgctggggtgtgcattcctaatctttgtagctga
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